Os12g0530100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase 24 precursor (EC 1.11.1.7) (Atperox P24) (ATP47).
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Os12g0530100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase 24 precursor (EC 1.11.1.7) (Atperox P24) (ATP47).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.59 | 0.44 | 3.19 | -0.254 | 0.211 | 0.52 | 0.0782 | -2.35 | -0.0081 | 7.83 | 0.03846 | 3636 | -- | -- |
| 92.74 | 0.449 | 3.15 | -0.258 | 0.245 | 0.174 | 0.0892 | -- | -0.00698 | 7.68 | 0.08585 | 5008 | -- | -- |
| 87.6 | 0.436 | 3.19 | -0.256 | 0.209 | 0.521 | -- | -2.37 | -0.0114 | 7.8 | 0.06989 | 3630 | -- | -- |
| 92.57 | 0.448 | 3.15 | -0.256 | 0.207 | 0.137 | -- | -- | -0.0277 | 7.72 | -0.007623 | 7260 | -- | -- |
| 89.97 | 0.442 | 3.2 | -0.273 | -- | 0.613 | -- | -2.7 | -0.00641 | -- | 0.2065 | 3612 | -- | -- |
| 92.94 | 0.452 | 3.16 | -0.226 | 0.211 | -- | 0.0412 | -- | -0.0408 | 8.17 | -- | -- | -- | -- |
| 92.94 | 0.451 | 3.16 | -0.225 | 0.211 | -- | -- | -- | -0.0409 | 8.17 | -- | -- | -- | -- |
| 94.99 | 0.454 | 3.15 | -0.242 | -- | 0.128 | -- | -- | -0.0201 | -- | 3.2e-06 | 7260 | -- | -- |
| 94.12 | 0.452 | 3.15 | -- | 0.22 | 0.0768 | -- | -- | -0.00192 | 8.14 | -6.426e-08 | 7420 | -- | -- |
| 95.4 | 0.456 | 3.16 | -0.224 | -- | -- | -- | -- | -0.0384 | -- | -- | -- | -- | -- |
| 94.28 | 0.454 | 3.15 | -- | 0.21 | -- | -- | -- | -0.0158 | 8.25 | -- | -- | -- | -- |
| 96.53 | 0.458 | 3.15 | -- | -- | 0.0854 | -- | -- | -0.00156 | -- | -1.85e-06 | 7260 | -- | -- |
| 96.72 | 0.459 | 3.16 | -- | -- | -- | -- | -- | -0.0136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.27 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 4 | 85.27 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 85.49 | wind | 9.0 | 90 | > th | dose dependent | rect. | 17 | 17 |
| 8 | 85.55 | wind | 9.0 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 16 | 85.56 | wind | 9.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 19 | 85.57 | wind | 9.0 | 90 | > th | dose dependent | rect. | 17 | 4 |
| 23 | 85.97 | wind | 9.0 | 90 | > th | dose independent | rect. | 17 | 17 |
| 24 | 86.00 | wind | 9.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 56 | 86.52 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 4 |
| 58 | 86.53 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 62 | 86.64 | humidity | 90.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 80 | 86.64 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 120 | 86.76 | wind | 1.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 121 | 86.85 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 4 |
| 122 | 86.85 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 4 |
| 123 | 86.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 124 | 86.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 132 | 86.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 4 |
| 133 | 86.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 4 |
| 135 | 86.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 136 | 86.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 137 | 86.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 2 |
| 138 | 86.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 140 | 86.97 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 7 |
| 143 | 86.99 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 144 | 87.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 146 | 87.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 153 | 87.02 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 154 | 87.02 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 165 | 87.07 | wind | 9.0 | 90 | > th | dose independent | sin | 13 | NA |
| 166 | 87.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 169 | 87.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 174 | 87.11 | wind | 9.0 | 90 | > th | dose dependent | sin | 13 | NA |
| 178 | 87.13 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 197 | 87.18 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 202 | 87.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 7 |
| 208 | 87.19 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 215 | 87.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 9 |
| 223 | 87.23 | wind | 3.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 224 | 87.23 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 225 | 87.23 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 5 |
| 226 | 87.24 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 242 | 87.27 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 243 | 87.27 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 246 | 87.27 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 2 | 10 |
| 262 | 87.28 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 17 |
| 267 | 87.29 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 272 | 87.29 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 345 | 87.29 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 408 | 87.29 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 434 | 87.29 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 439 | 87.29 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 585 | 87.30 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 643 | 87.32 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 670 | 87.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 673 | 87.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 9 |
| 683 | 87.36 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 686 | 87.36 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 689 | 87.36 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 698 | 87.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 738 | 87.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 739 | 87.41 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 745 | 87.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 751 | 87.43 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 758 | 87.44 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 7 |
| 762 | 87.44 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 7 |
| 769 | 87.45 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 789 | 87.49 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 876 | 87.54 | wind | 9.0 | 90 | > th | dose independent | rect. | 14 | 5 |
| 909 | 87.58 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 914 | 87.59 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 921 | 87.59 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 923 | 87.60 | wind | 1.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 948 | 87.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 21 |
| 959 | 87.66 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 14 | NA |
| 967 | 87.67 | wind | 1.0 | 4320 | < th | dose independent | rect. | 19 | 1 |