Os12g0528300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Clathrin adaptor complex, medium chain family protein.
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Os12g0528300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Clathrin adaptor complex, medium chain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.75 | 0.392 | 6.93 | -0.636 | 0.418 | 0.57 | -0.0335 | 0.19 | -0.242 | 9.06 | 21.24 | 943 | -- | -- |
| 69.84 | 0.389 | 6.93 | -0.68 | 0.414 | 0.557 | -0.0894 | -- | -0.254 | 9.05 | 21.29 | 947 | -- | -- |
| 69.76 | 0.389 | 6.93 | -0.634 | 0.418 | 0.57 | -- | 0.202 | -0.242 | 9.08 | 21.24 | 942 | -- | -- |
| 69.87 | 0.389 | 6.93 | -0.684 | 0.414 | 0.557 | -- | -- | -0.254 | 9.09 | 21.27 | 949 | -- | -- |
| 77.87 | 0.411 | 6.93 | -0.627 | -- | 0.562 | -- | 0.285 | -0.238 | -- | 21.37 | 1353 | -- | -- |
| 79.58 | 0.418 | 6.9 | -0.465 | 0.344 | -- | -0.15 | -- | -0.103 | 8.45 | -- | -- | -- | -- |
| 79.64 | 0.418 | 6.9 | -0.469 | 0.343 | -- | -- | -- | -0.102 | 8.59 | -- | -- | -- | -- |
| 78.06 | 0.411 | 6.94 | -0.689 | -- | 0.532 | -- | -- | -0.243 | -- | 21.32 | 1330 | -- | -- |
| 79.85 | 0.416 | 6.91 | -- | 0.383 | 0.357 | -- | -- | -0.177 | 9.2 | 22.31 | 983 | -- | -- |
| 86.26 | 0.434 | 6.91 | -0.468 | -- | -- | -- | -- | -0.0992 | -- | -- | -- | -- | -- |
| 85.43 | 0.432 | 6.89 | -- | 0.342 | -- | -- | -- | -0.05 | 8.69 | -- | -- | -- | -- |
| 87.85 | 0.437 | 6.92 | -- | -- | 0.309 | -- | -- | -0.142 | -- | 22.34 | 1282 | -- | -- |
| 92.03 | 0.448 | 6.9 | -- | -- | -- | -- | -- | -0.0473 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 2 | 63.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 7 | 63.67 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 39 | 64.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 44 | 64.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 46 | 64.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 50 | 64.94 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 103 | 65.67 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 7 |
| 148 | 66.03 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 159 | 66.09 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 175 | 66.25 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 184 | 66.34 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 202 | 66.44 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 10 |
| 231 | 66.59 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 235 | 66.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 278 | 66.82 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 294 | 66.91 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 314 | 67.02 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 17 |
| 329 | 67.10 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 344 | 67.17 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 452 | 67.57 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 485 | 67.67 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 13 |
| 511 | 67.75 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 704 | 68.50 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 5 |
| 753 | 68.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 799 | 68.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 831 | 68.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 1 |