Os12g0516800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os12g0516800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.84 | 0.592 | 6.02 | -3.91 | 1.53 | -2.24 | -0.486 | 1.24 | -0.438 | 6.42 | 24.47 | 6201 | -- | -- |
| 159.21 | 0.588 | 5.98 | -3.79 | 1.54 | -2.59 | -0.432 | -- | -0.404 | 6.44 | 23.58 | 6237 | -- | -- |
| 159.36 | 0.588 | 6.02 | -3.91 | 1.52 | -2.26 | -- | 1.18 | -0.431 | 6.38 | 24.3 | 6161 | -- | -- |
| 159.7 | 0.589 | 5.98 | -3.81 | 1.53 | -2.61 | -- | -- | -0.402 | 6.35 | 23.43 | 6175 | -- | -- |
| 276.64 | 0.775 | 6.05 | -3.9 | -- | -2.23 | -- | 1.38 | -0.41 | -- | 24.9 | 5697 | -- | -- |
| 239.64 | 0.726 | 5.84 | -2.45 | 1.53 | -- | -0.451 | -- | 0.222 | 6.32 | -- | -- | -- | -- |
| 240.12 | 0.726 | 5.84 | -2.45 | 1.53 | -- | -- | -- | 0.223 | 6.27 | -- | -- | -- | -- |
| 277.1 | 0.775 | 6.01 | -3.75 | -- | -2.6 | -- | -- | -0.374 | -- | 23.8 | 5718 | -- | -- |
| 386.89 | 0.921 | 5.81 | -- | 1.57 | -0.841 | -- | -- | 0.34 | 5.92 | 25.7 | 760 | -- | -- |
| 362.04 | 0.889 | 5.86 | -2.41 | -- | -- | -- | -- | 0.256 | -- | -- | -- | -- | -- |
| 398.55 | 0.934 | 5.77 | -- | 1.5 | -- | -- | -- | 0.496 | 6.36 | -- | -- | -- | -- |
| 501.93 | 1.04 | 5.84 | -- | -- | -0.895 | -- | -- | 0.354 | -- | 26.2 | 1322 | -- | -- |
| 515.3 | 1.06 | 5.8 | -- | -- | -- | -- | -- | 0.524 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.73 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 2 | 158.30 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 3 | 158.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 6 | 159.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 11 | 159.24 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 13 | 159.35 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 19 | 159.51 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 22 | 159.55 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 25 | 159.59 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 41 | 160.01 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 56 | 160.29 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 59 | 160.32 | wind | 5 | 43200 | < th | dose independent | sin | 16 | NA |
| 61 | 160.35 | wind | 5 | 43200 | > th | dose independent | sin | 16 | NA |
| 76 | 160.52 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 77 | 160.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 104 | 160.89 | wind | 3 | 43200 | > th | dose dependent | sin | 17 | NA |
| 130 | 161.19 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 132 | 161.22 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 135 | 161.23 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 7 |
| 138 | 161.24 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 139 | 161.24 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 144 | 161.27 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 7 |
| 153 | 161.32 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 5 |
| 179 | 161.45 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 192 | 161.53 | wind | 5 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 199 | 161.56 | wind | 5 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 312 | 161.99 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 322 | 162.03 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 326 | 162.07 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 334 | 162.09 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 344 | 162.11 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 13 |
| 388 | 162.26 | temperature | 25 | 4320 | < th | dose dependent | sin | 7 | NA |
| 406 | 162.31 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 529 | 162.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 15 |
| 574 | 162.79 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 11 |
| 596 | 162.84 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 597 | 162.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 14 |
| 676 | 162.96 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 14 |
| 677 | 162.97 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 806 | 163.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 889 | 163.30 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 908 | 163.33 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 982 | 163.42 | wind | 9 | 43200 | < th | dose dependent | sin | 18 | NA |