Os12g0514300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
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Os12g0514300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF588 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.89 | 0.495 | 8.59 | 0.443 | 0.716 | 1.8 | 0.631 | 1.46 | -0.81 | 7.99 | 22.48 | 383 | -- | -- |
| 112.59 | 0.494 | 8.57 | 0.582 | 0.726 | 1.47 | 0.877 | -- | -0.779 | 7.75 | 22.75 | 418 | -- | -- |
| 111.95 | 0.493 | 8.6 | 0.448 | 0.715 | 1.91 | -- | 1.82 | -0.812 | 8.02 | 22.31 | 383 | -- | -- |
| 114.76 | 0.499 | 8.57 | 0.599 | 0.722 | 1.47 | -- | -- | -0.783 | 7.9 | 22.73 | 412 | -- | -- |
| 137.6 | 0.546 | 8.61 | 0.469 | -- | 2.06 | -- | 1.93 | -0.771 | -- | 22.52 | 487 | -- | -- |
| 136.12 | 0.547 | 8.61 | 0.239 | 0.822 | -- | 0.855 | -- | -0.985 | 7.66 | -- | -- | -- | -- |
| 138.18 | 0.55 | 8.61 | 0.26 | 0.822 | -- | -- | -- | -0.986 | 7.7 | -- | -- | -- | -- |
| 140.96 | 0.553 | 8.56 | 0.654 | -- | 1.43 | -- | -- | -0.661 | -- | 25.94 | 529 | -- | -- |
| 123.16 | 0.517 | 8.58 | -- | 0.733 | 1.23 | -- | -- | -0.858 | 7.92 | 22.81 | 411 | -- | -- |
| 174.59 | 0.617 | 8.63 | 0.271 | -- | -- | -- | -- | -0.974 | -- | -- | -- | -- | -- |
| 139.97 | 0.553 | 8.62 | -- | 0.824 | -- | -- | -- | -1.01 | 7.67 | -- | -- | -- | -- |
| 151.04 | 0.572 | 8.59 | -- | -- | 1.18 | -- | -- | -0.781 | -- | 26.07 | 518 | -- | -- |
| 176.53 | 0.62 | 8.64 | -- | -- | -- | -- | -- | -1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 102.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 102.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 102.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 6 | 104.13 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 7 | 104.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 8 | 104.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 9 | 104.60 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 12 | 104.86 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 20 |
| 16 | 105.33 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 22 | 105.63 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 23 | 105.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 24 | 105.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 28 | 105.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 29 | 106.01 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 30 | 106.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 31 | 106.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 32 | 106.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 33 | 106.24 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 35 | 106.31 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 36 | 106.36 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 42 | 106.59 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 43 | 106.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 49 | 106.68 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 52 | 106.70 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 53 | 106.74 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 55 | 106.74 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 60 | 106.85 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 65 | 106.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 66 | 106.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 67 | 106.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 74 | 107.08 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 77 | 107.13 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 81 | 107.21 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 87 | 107.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 88 | 107.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 97 | 107.38 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 108 | 107.45 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 112 | 107.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 113 | 107.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 120 | 107.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 121 | 107.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 128 | 107.68 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 137 | 107.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 145 | 107.85 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 150 | 107.87 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 154 | 107.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 157 | 107.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 164 | 108.04 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 166 | 108.05 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 172 | 108.09 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 176 | 108.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 177 | 108.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 188 | 108.20 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 191 | 108.24 | wind | 9.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 196 | 108.31 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 202 | 108.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 204 | 108.36 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 214 | 108.43 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 221 | 108.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 245 | 108.68 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 258 | 108.75 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 331 | 109.12 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 20 |
| 384 | 109.41 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 386 | 109.42 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 395 | 109.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 398 | 109.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 415 | 109.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 431 | 109.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 440 | 109.62 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 485 | 109.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 486 | 109.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 516 | 109.97 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 546 | 110.09 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 561 | 110.14 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 592 | 110.27 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 604 | 110.33 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 613 | 110.39 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 644 | 110.55 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 701 | 110.82 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 714 | 110.88 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 770 | 111.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 819 | 111.27 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 841 | 111.36 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 904 | 111.53 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 905 | 111.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 916 | 111.57 | temperature | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 929 | 111.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 931 | 111.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 942 | 111.65 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 12 |
| 970 | 111.70 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 979 | 111.73 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 3 |