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Os12g0512100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sugar transporter family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0407) R2 : 0.906
β1 : 1.18 (0.149) R2dD : 0.0121 R2D : 0.0124
β2 : 4.06 (0.153) R2dC : 0.31 R2C : 0.689
β3 : -3.21 (0.147) R2dE : 0.207 R2E : 0.581
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00178 (0.0874) R2dN8 : -2.22e-06 R2N8 : -0.00061
σ : 0.761
deviance : 267.23
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_____
C
peak time of C : 4.37
E
wheather : temperature
threshold : 19.1
memory length : 170
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 12.6
open length of G : 5.91

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
253.63 0.748 13.2 1.05 3.95 -3.44 -3.33 -1.3 -0.0406 4.14 19.85 255 12.1 5.92
255.58 0.745 13.2 1.13 3.99 -3.37 -2.52 -- -0.0411 4.19 19.8 241 12.1 5.9
264.14 0.757 13.1 1.17 3.83 -3.8 -- 1.42 0.0819 4.42 19.54 284 11.7 5.57
267.23 0.761 13.1 1.18 4.06 -3.21 -- -- 0.00178 4.37 19.1 170 12.6 5.91
395.71 0.926 13 0.713 -- -6.26 -- 0.223 0.3 -- 13.76 300 10.5 7.32
493.09 1.04 13.1 0.886 6.6 -- -1.74 -- -0.241 4.76 -- -- -- --
500.92 1.05 13.1 0.894 6.59 -- -- -- -0.232 4.79 -- -- -- --
359.22 0.883 13.2 1.03 -- -6.28 -- -- 0.0154 -- 11.79 313 10.2 7.88
297.7 0.804 13.2 -- 4.23 -3.02 -- -- -0.188 4.38 18.98 158 12.7 5.82
2796.77 2.47 13.2 1.14 -- -- -- -- -0.0607 -- -- -- -- --
521.99 1.07 13.2 -- 6.6 -- -- -- -0.331 4.79 -- -- -- --
341.32 0.86 13.2 -- -- -7.1 -- -- -0.242 -- -19.65 495 8.88 7.52
2831.11 2.48 13.2 -- -- -- -- -- -0.187 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 255.52 temperature 20.0 270 > th dose independent rect. 12 6
3 257.47 temperature 20.0 270 > th dose independent rect. 13 4
6 264.95 precipitation 0.1 270 < th dose independent rect. 17 19
7 264.95 precipitation 0.1 270 < th dose dependent rect. 17 19
10 265.15 precipitation 0.1 90 < th dose independent rect. 19 18
11 265.15 precipitation 0.1 90 < th dose dependent rect. 19 18
12 266.06 temperature 10.0 90 > th dose independent rect. 13 6
14 266.06 atmosphere 1010.0 90 < th dose independent rect. 13 6
16 266.06 temperature 10.0 90 > th dose independent rect. 19 18
17 266.06 atmosphere 995.0 90 > th dose independent rect. 19 18
18 267.52 wind 9.0 90 < th dose independent rect. 19 18
19 268.17 wind 9.0 90 < th dose independent rect. 13 6
20 269.12 temperature 10.0 270 > th dose independent rect. 13 4
22 269.12 atmosphere 1010.0 270 < th dose independent rect. 13 4
24 269.12 temperature 10.0 270 > th dose independent rect. 17 20
28 269.69 wind 9.0 270 < th dose independent rect. 13 4
35 270.22 wind 1.0 90 > th dose independent rect. 13 6
45 270.84 wind 9.0 270 < th dose independent rect. 17 20
47 271.20 radiation 40.0 90 < th dose independent rect. 13 6
59 273.04 precipitation 0.1 270 < th dose independent rect. 13 4
60 273.04 precipitation 0.1 270 < th dose dependent rect. 13 4
67 274.31 humidity 50.0 270 > th dose independent rect. 18 17
70 275.73 radiation 1.0 270 > th dose independent rect. 13 4
71 275.79 humidity 50.0 270 > th dose independent rect. 13 4
72 276.38 atmosphere 995.0 270 > th dose independent rect. 13 4
76 276.62 precipitation 0.1 270 < th dose independent rect. 7 15
77 276.62 precipitation 0.1 270 < th dose dependent rect. 7 15
78 276.65 humidity 90.0 270 < th dose independent rect. 12 5
108 283.71 wind 9.0 270 < th dose independent rect. 22 9
110 283.80 temperature 10.0 270 > th dose independent rect. 22 9
111 283.80 temperature 30.0 270 < th dose independent rect. 22 9
112 283.80 humidity 50.0 270 > th dose independent rect. 22 9
114 283.80 atmosphere 995.0 270 > th dose independent rect. 22 9
115 283.80 radiation 40.0 270 < th dose independent rect. 22 9
116 283.80 temperature 10.0 270 > th dose independent rect. 7 15
123 286.09 humidity 50.0 270 > th dose independent rect. 12 6
129 286.97 precipitation 0.1 270 < th dose independent rect. 22 9
130 286.97 precipitation 0.1 270 < th dose dependent rect. 22 9
133 287.53 precipitation 0.1 270 < th dose independent rect. 17 8
134 287.53 precipitation 0.1 270 < th dose dependent rect. 17 8
135 287.54 temperature 10.0 270 > th dose independent rect. 6 6
136 287.54 atmosphere 995.0 270 > th dose independent rect. 6 6
137 287.54 atmosphere 1015.0 270 < th dose independent rect. 6 6
138 287.54 temperature 10.0 270 > th dose independent rect. 12 18
139 287.67 temperature 10.0 270 > th dose independent rect. 5 8
140 287.67 atmosphere 995.0 270 > th dose independent rect. 5 8
141 287.67 atmosphere 1015.0 270 < th dose independent rect. 5 8
142 287.67 temperature 10.0 270 > th dose independent rect. 13 16
143 287.75 precipitation 0.1 270 < th dose independent rect. 6 6
144 287.75 precipitation 0.1 270 < th dose dependent rect. 6 6
146 287.78 wind 9.0 270 < th dose independent rect. 12 18
147 287.92 radiation 40.0 270 < th dose dependent rect. 22 9
148 288.02 precipitation 0.1 270 < th dose independent rect. 5 8
149 288.02 precipitation 0.1 270 < th dose dependent rect. 5 8
150 288.05 wind 9.0 270 < th dose independent rect. 6 6
151 288.11 wind 9.0 270 < th dose independent rect. 13 16
155 288.41 temperature 10.0 270 > th dose independent rect. 17 8
156 288.41 radiation 20.0 270 < th dose independent rect. 17 8
159 288.41 temperature 10.0 270 > th dose independent rect. 1 16
160 288.41 atmosphere 1015.0 270 < th dose independent rect. 1 16
162 288.70 radiation 1.0 270 > th dose independent rect. 17 20
163 288.78 wind 9.0 270 < th dose independent rect. 5 8
180 289.50 wind 9.0 270 < th dose independent rect. 7 15
182 289.70 wind 1.0 270 > th dose independent rect. 17 8
193 290.35 wind 9.0 270 < th dose independent rect. 1 16
196 290.55 wind 9.0 270 < th dose independent rect. 17 8
203 290.81 wind 1.0 270 > th dose independent rect. 6 6
208 291.16 humidity 50.0 270 > th dose independent rect. 6 6
223 292.14 radiation 40.0 270 < th dose independent rect. 13 4
231 292.34 radiation 40.0 270 < th dose dependent rect. 16 9
238 292.83 precipitation 0.1 270 < th dose independent rect. 1 16
239 292.83 precipitation 0.1 270 < th dose dependent rect. 1 16
252 293.26 radiation 1.0 270 > th dose independent rect. 6 6
254 293.39 atmosphere 995.0 270 > th dose independent rect. 17 8
286 293.98 atmosphere 995.0 270 > th dose independent rect. 1 16
295 294.72 temperature 10.0 270 > th dose dependent rect. 6 6
321 295.37 humidity 50.0 270 > th dose independent rect. 17 8
370 297.13 radiation 40.0 270 < th dose independent rect. 14 2
371 297.16 wind 1.0 90 > th dose dependent rect. 13 6
373 297.31 wind 1.0 270 > th dose independent rect. 7 15
389 297.85 radiation 1.0 270 > th dose independent rect. 12 17
391 297.90 atmosphere 995.0 270 > th dose independent rect. 12 18
406 298.11 precipitation 0.1 270 < th dose independent rect. 12 18
407 298.11 precipitation 0.1 270 < th dose dependent rect. 12 18
410 298.35 temperature 10.0 90 > th dose dependent rect. 19 18
415 298.50 radiation 40.0 270 < th dose independent rect. 18 17
424 298.68 atmosphere 1015.0 90 < th dose independent rect. 19 18
425 298.71 temperature 10.0 270 > th dose independent rect. 7 4
426 298.71 atmosphere 995.0 270 > th dose independent rect. 7 4
427 298.71 atmosphere 1015.0 270 < th dose independent rect. 7 4
428 298.71 temperature 10.0 270 > th dose independent rect. 11 20
430 298.94 wind 9.0 270 < th dose independent rect. 7 4
437 298.97 precipitation 0.1 270 < th dose independent rect. 7 4
438 298.97 precipitation 0.1 270 < th dose dependent rect. 7 4
441 299.11 wind 9.0 270 < th dose independent rect. 11 20
442 299.12 humidity 50.0 270 > th dose independent rect. 7 4
453 299.47 atmosphere 1015.0 270 < th dose independent rect. 22 9
457 299.62 wind 1.0 270 > th dose independent rect. 17 19
464 300.03 wind 1.0 270 > th dose independent rect. 7 4
474 300.23 temperature 10.0 270 > th dose dependent rect. 12 5
491 301.34 atmosphere 1015.0 270 < th dose independent rect. 7 15
497 301.51 radiation 1.0 90 < th dose dependent sin 15 NA
500 301.65 temperature 10.0 270 > th dose dependent rect. 7 4
507 301.96 humidity 50.0 270 > th dose independent rect. 1 16
511 302.11 humidity 50.0 270 > th dose independent rect. 13 17
524 302.52 temperature 10.0 270 > th dose dependent rect. 13 3
547 303.12 radiation 1.0 270 > th dose independent rect. 7 4
623 307.02 humidity 50.0 10 > th dose independent rect. 14 5
642 307.30 humidity 50.0 270 > th dose dependent rect. 22 9
656 307.72 radiation 1.0 90 < th dose dependent rect. 18 7
663 307.94 radiation 40.0 10 < th dose dependent rect. 13 6
693 308.87 temperature 10.0 10 > th dose independent rect. 19 7
694 308.87 temperature 30.0 10 < th dose independent rect. 19 7
695 308.87 humidity 50.0 10 > th dose independent rect. 19 7
697 308.87 atmosphere 995.0 10 > th dose independent rect. 19 7
698 308.87 radiation 1.0 10 < th dose independent rect. 19 7
703 308.87 temperature 10.0 10 > th dose independent rect. 2 17
705 308.87 atmosphere 1015.0 10 < th dose independent rect. 2 17
706 308.87 radiation 1.0 10 < th dose dependent rect. 19 7
740 309.76 wind 9.0 10 < th dose independent rect. 19 7
768 310.12 atmosphere 1015.0 270 < th dose independent rect. 12 18
775 310.36 radiation 40.0 90 < th dose independent rect. 13 18
792 310.69 precipitation 0.1 10 < th dose independent rect. 19 7
793 310.69 precipitation 0.1 10 < th dose dependent rect. 19 7
803 310.93 precipitation 0.1 270 < th dose independent rect. 11 20
804 310.93 precipitation 0.1 270 < th dose dependent rect. 11 20
825 311.54 wind 9.0 10 < th dose independent rect. 2 17
826 311.58 radiation 1.0 10 > th dose independent rect. 8 6
833 311.66 wind 9.0 270 < th dose dependent rect. 22 9
937 313.72 atmosphere 1015.0 90 < th dose dependent rect. 13 6
974 314.37 precipitation 0.1 30 < th dose independent rect. 2 17
975 314.37 precipitation 0.1 30 < th dose dependent rect. 2 17
976 314.39 radiation 40.0 270 < th dose independent rect. 7 4