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Os12g0510200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0171) R2 : 0.498
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.807 (0.0406) R2dC : 0.435 R2C : 0.411
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.281 (0.0359) R2dN8 : 0.087 R2N8 : 0.0631
σ : 0.322
deviance : 47.25
__
_____
C
peak time of C : 11.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.31 0.295 11.3 0.153 0.957 0.545 -0.462 -0.6 0.333 12.9 70 334 -- --
39.93 0.294 11.3 0.105 0.942 0.517 -0.293 -- 0.319 12.9 70.94 345 -- --
40.01 0.295 11.3 0.125 0.936 0.545 -- -0.367 0.327 13 70.21 357 -- --
40.28 0.296 11.4 0.0963 0.943 0.534 -- -- 0.319 13 70.6 353 -- --
64.54 0.374 11.3 -0.0612 -- 0.719 -- 0.302 0.302 -- 72 935 -- --
46.6 0.32 11.4 0.0454 0.806 -- -0.381 -- 0.285 11.4 -- -- -- --
47.23 0.322 11.4 0.03 0.807 -- -- -- 0.284 11.4 -- -- -- --
62.69 0.369 11.4 0.135 -- 0.844 -- -- 0.341 -- 72.41 958 -- --
40.52 0.296 11.4 -- 0.935 0.523 -- -- 0.308 12.9 70.67 357 -- --
88.1 0.439 11.4 0.0089 -- -- -- -- 0.276 -- -- -- -- --
47.25 0.322 11.4 -- 0.807 -- -- -- 0.281 11.4 -- -- -- --
63.16 0.37 11.4 -- -- 0.83 -- -- 0.324 -- 72.23 951 -- --
88.1 0.438 11.4 -- -- -- -- -- 0.275 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.48 radiation 40.0 270 < th dose dependent rect. 4 21
2 32.54 radiation 30.0 270 < th dose independent rect. 13 11
4 32.59 radiation 20.0 270 < th dose independent rect. 5 19
5 32.64 radiation 20.0 270 < th dose independent rect. 4 21
7 32.86 radiation 30.0 270 < th dose dependent rect. 5 19
19 33.45 radiation 40.0 30 < th dose dependent rect. 6 21
20 33.47 radiation 40.0 270 < th dose dependent rect. 13 11
22 33.56 humidity 80.0 10 > th dose independent rect. 3 3
24 33.58 humidity 50.0 10 > th dose dependent rect. 3 3
27 33.60 wind 9.0 10 < th dose independent rect. 3 3
28 33.60 temperature 10.0 10 > th dose independent rect. 3 3
30 33.60 temperature 30.0 10 < th dose independent rect. 3 3
31 33.60 humidity 50.0 10 > th dose independent rect. 3 3
34 33.60 atmosphere 995.0 10 > th dose independent rect. 3 3
35 33.60 atmosphere 1010.0 10 < th dose independent rect. 3 3
37 33.60 radiation 20.0 10 < th dose independent rect. 3 3
40 33.60 temperature 10.0 10 > th dose independent rect. 6 21
43 33.63 precipitation 0.1 30 < th dose independent rect. 3 3
44 33.63 precipitation 0.1 30 < th dose dependent rect. 3 3
45 33.64 atmosphere 995.0 10 > th dose independent rect. 6 21
49 33.67 radiation 40.0 30 < th dose dependent rect. 3 3
76 33.83 radiation 40.0 90 < th dose independent rect. 6 20
77 33.84 wind 9.0 10 < th dose dependent rect. 3 3
81 33.93 wind 7.0 30 < th dose independent rect. 12 18
97 34.09 wind 9.0 30 < th dose independent rect. 6 21
101 34.13 wind 9.0 30 < th dose dependent rect. 6 6
102 34.15 radiation 1.0 90 < th dose independent rect. 2 5
130 34.20 humidity 70.0 270 > th dose independent rect. 4 20
132 34.20 precipitation 0.1 10 < th dose independent rect. 6 21
133 34.20 precipitation 0.1 10 < th dose dependent rect. 6 21
166 34.29 temperature 20.0 30 > th dose independent rect. 6 6
167 34.30 radiation 1.0 90 < th dose independent rect. 2 9
175 34.32 atmosphere 1015.0 10 < th dose dependent rect. 2 4
185 34.35 atmosphere 1015.0 10 < th dose independent rect. 6 21
186 34.36 atmosphere 1015.0 270 < th dose dependent rect. 1 2
187 34.37 wind 9.0 1440 < th dose independent rect. 3 4
188 34.37 temperature 10.0 1440 > th dose independent rect. 3 4
191 34.37 temperature 30.0 1440 < th dose independent rect. 3 4
195 34.37 humidity 50.0 1440 > th dose independent rect. 3 4
200 34.37 atmosphere 995.0 1440 > th dose independent rect. 3 4
201 34.37 radiation 40.0 1440 < th dose independent rect. 3 4
205 34.37 temperature 10.0 1440 > th dose independent rect. 7 20
212 34.38 humidity 50.0 10 > th dose independent rect. 12 18
213 34.38 temperature 10.0 30 > th dose dependent rect. 3 3
254 34.52 atmosphere 1015.0 1440 < th dose independent rect. 4 3
264 34.53 precipitation 0.1 10 < th dose independent rect. 12 18
265 34.53 precipitation 0.1 10 < th dose dependent rect. 12 18
272 34.57 wind 9.0 10 < th dose independent rect. 6 6
319 34.74 humidity 90.0 10 < th dose independent rect. 6 6
320 34.74 radiation 1.0 90 < th dose dependent rect. 2 9
347 34.83 wind 9.0 270 < th dose independent rect. 1 2
348 34.83 temperature 10.0 270 > th dose independent rect. 1 2
350 34.83 temperature 30.0 270 < th dose independent rect. 1 2
351 34.83 humidity 50.0 270 > th dose independent rect. 1 2
354 34.83 atmosphere 995.0 270 > th dose independent rect. 1 2
355 34.83 atmosphere 1010.0 270 < th dose independent rect. 1 2
357 34.83 radiation 1.0 270 < th dose independent rect. 1 2
362 34.83 precipitation 0.1 270 < th dose independent rect. 1 2
363 34.83 temperature 10.0 10 > th dose independent rect. 6 6
365 34.83 atmosphere 995.0 10 > th dose independent rect. 6 6
366 34.83 atmosphere 1015.0 10 < th dose independent rect. 6 6
367 34.83 temperature 10.0 10 > th dose independent rect. 12 18
368 34.83 temperature 10.0 270 > th dose independent rect. 3 22
369 34.83 humidity 50.0 270 > th dose dependent rect. 1 2
370 34.83 radiation 1.0 270 < th dose dependent rect. 1 2
375 34.83 precipitation 0.1 270 < th dose dependent rect. 1 2
376 34.84 precipitation 0.1 10 < th dose independent rect. 6 6
378 34.84 atmosphere 995.0 270 > th dose independent rect. 4 21
381 34.84 precipitation 0.1 10 < th dose dependent rect. 6 6
486 35.15 radiation 1.0 90 > th dose independent sin 4 NA
487 35.15 radiation 1.0 90 < th dose independent sin 4 NA
518 35.26 temperature 10.0 1440 > th dose independent rect. 7 6
521 35.26 atmosphere 995.0 1440 > th dose independent rect. 7 6
522 35.26 temperature 10.0 1440 > th dose independent rect. 13 18
525 35.26 wind 9.0 30 < th dose dependent rect. 12 18
542 35.35 radiation 1.0 30 > th dose independent rect. 6 6
552 35.38 radiation 1.0 90 < th dose dependent sin 4 NA
559 35.40 temperature 30.0 10 < th dose independent rect. 6 6
568 35.42 atmosphere 995.0 10 > th dose dependent rect. 3 3
576 35.44 temperature 30.0 10 < th dose dependent rect. 2 4
578 35.45 radiation 1.0 270 < th dose dependent sin 8 NA
595 35.51 humidity 50.0 10 > th dose independent rect. 6 6
599 35.51 temperature 10.0 10 > th dose dependent rect. 6 6
619 35.61 radiation 1.0 270 < th dose dependent rect. 23 12
620 35.62 wind 7.0 30 < th dose independent rect. 14 16
630 35.66 wind 1.0 10 > th dose independent rect. 6 6
641 35.69 precipitation 0.1 270 < th dose independent rect. 4 21
643 35.69 precipitation 0.1 270 < th dose dependent rect. 4 21
775 35.88 temperature 30.0 10 < th dose independent rect. 6 8
785 35.90 atmosphere 995.0 10 > th dose independent rect. 12 18
800 35.93 wind 1.0 270 > th dose independent rect. 1 2
934 36.10 wind 9.0 30 < th dose dependent rect. 14 16
936 36.11 humidity 50.0 10 > th dose independent rect. 14 16
937 36.11 wind 9.0 270 < th dose independent rect. 4 21
938 36.11 temperature 10.0 270 > th dose dependent rect. 1 2
987 36.19 temperature 30.0 270 < th dose dependent rect. 1 2