Os12g0510000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0510000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.42 | 0.454 | 9.49 | -1.1 | 0.557 | -0.61 | 0.0449 | -2.25 | -0.272 | 6.17 | 20.7 | 3127 | -- | -- |
| 98.11 | 0.461 | 9.4 | -0.655 | 0.562 | -0.474 | 0.0948 | -- | -0.138 | 6.1 | 24.87 | 3170 | -- | -- |
| 93.37 | 0.45 | 9.49 | -1.11 | 0.559 | -0.6 | -- | -2.23 | -0.273 | 6.17 | 20.8 | 3131 | -- | -- |
| 98.11 | 0.461 | 9.4 | -0.643 | 0.556 | -0.488 | -- | -- | -0.132 | 6.07 | 24.8 | 3180 | -- | -- |
| 109.23 | 0.487 | 9.5 | -1.1 | -- | -0.611 | -- | -2.3 | -0.264 | -- | 20.9 | 3275 | -- | -- |
| 103.77 | 0.478 | 9.42 | -0.815 | 0.559 | -- | 0.0609 | -- | -0.253 | 6.2 | -- | -- | -- | -- |
| 103.78 | 0.477 | 9.42 | -0.815 | 0.559 | -- | -- | -- | -0.253 | 6.21 | -- | -- | -- | -- |
| 113.02 | 0.495 | 9.4 | -0.607 | -- | -0.526 | -- | -- | -0.108 | -- | 24.9 | 3462 | -- | -- |
| 104 | 0.475 | 9.33 | -- | 0.561 | -0.528 | -- | -- | 0.0281 | 6.23 | 24.2 | 40744 | -- | -- |
| 120.01 | 0.512 | 9.43 | -0.799 | -- | -- | -- | -- | -0.241 | -- | -- | -- | -- | -- |
| 121.27 | 0.515 | 9.4 | -- | 0.548 | -- | -- | -- | -0.163 | 6.29 | -- | -- | -- | -- |
| 119.1 | 0.508 | 9.37 | -- | -- | -0.617 | -- | -- | 0.0631 | -- | 22.09 | 47520 | -- | -- |
| 136.86 | 0.546 | 9.41 | -- | -- | -- | -- | -- | -0.152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.32 | temperature | 30 | 10 | > th | dose independent | rect. | 9 | 7 |
| 16 | 92.40 | temperature | 30 | 90 | > th | dose independent | rect. | 9 | 7 |
| 46 | 92.83 | temperature | 30 | 270 | < th | dose independent | sin | 5 | NA |
| 62 | 92.86 | temperature | 30 | 270 | > th | dose independent | sin | 5 | NA |
| 80 | 93.10 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 11 |
| 132 | 93.50 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 133 | 93.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 134 | 93.51 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 13 |
| 135 | 93.52 | temperature | 30 | 270 | > th | dose independent | rect. | 11 | 2 |
| 142 | 93.67 | temperature | 30 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 146 | 93.73 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 147 | 93.73 | temperature | 30 | 270 | > th | dose dependent | rect. | 8 | 5 |
| 162 | 93.74 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 177 | 93.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 188 | 93.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 190 | 93.92 | temperature | 30 | 270 | > th | dose dependent | rect. | 11 | 2 |
| 193 | 93.95 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 196 | 93.96 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 197 | 93.96 | temperature | 30 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 216 | 93.98 | temperature | 30 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 366 | 94.18 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 406 | 94.24 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 5 |
| 443 | 94.30 | temperature | 30 | 270 | > th | dose dependent | sin | 8 | NA |
| 463 | 94.33 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 467 | 94.34 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 477 | 94.35 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 488 | 94.36 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 16 |
| 556 | 94.42 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 606 | 94.48 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 609 | 94.48 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 692 | 94.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 718 | 94.60 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 778 | 94.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 967 | 94.77 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |