Os12g0508300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein S14 family protein.
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Os12g0508300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein S14 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.72 | 0.363 | 13.7 | 0.23 | 0.681 | 0.734 | 0.629 | -0.148 | 0.0241 | 18.5 | 20.5 | 1237 | -- | -- |
| 59.78 | 0.36 | 13.7 | 0.248 | 0.688 | 0.76 | 0.596 | -- | 0.0294 | 18.5 | 20.5 | 1246 | -- | -- |
| 60.66 | 0.363 | 13.7 | 0.216 | 0.683 | 0.745 | -- | -0.184 | 0.0229 | 18.4 | 20.6 | 1276 | -- | -- |
| 60.73 | 0.363 | 13.7 | 0.244 | 0.686 | 0.774 | -- | -- | 0.025 | 18.4 | 20.5 | 1247 | -- | -- |
| 82.52 | 0.423 | 13.7 | 0.28 | -- | 0.732 | -- | 0.0196 | 0.0278 | -- | 20.6 | 705 | -- | -- |
| 73.31 | 0.401 | 13.6 | 0.572 | 0.67 | -- | 0.776 | -- | 0.201 | 18.8 | -- | -- | -- | -- |
| 74.83 | 0.405 | 13.6 | 0.559 | 0.673 | -- | -- | -- | 0.204 | 18.7 | -- | -- | -- | -- |
| 82.52 | 0.423 | 13.7 | 0.278 | -- | 0.728 | -- | -- | 0.0297 | -- | 20.51 | 705 | -- | -- |
| 62.09 | 0.367 | 13.7 | -- | 0.707 | 0.848 | -- | -- | 0.00725 | 18.5 | 20.4 | 1307 | -- | -- |
| 98.49 | 0.464 | 13.6 | 0.544 | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
| 83.08 | 0.426 | 13.7 | -- | 0.666 | -- | -- | -- | 0.141 | 18.7 | -- | -- | -- | -- |
| 84.34 | 0.428 | 13.7 | -- | -- | 0.807 | -- | -- | -0.0164 | -- | 20.58 | 763 | -- | -- |
| 106.29 | 0.481 | 13.6 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.17 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 2 | 58.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 3 | 58.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 4 | 58.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 6 | 58.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 7 | 58.38 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 11 | 58.44 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 13 | 58.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 24 | 58.54 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 67 | 58.93 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 104 | 59.11 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 179 | 59.42 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 7 |
| 214 | 59.55 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 263 | 59.70 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 268 | 59.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 282 | 59.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 288 | 59.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 439 | 60.17 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 453 | 60.20 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 454 | 60.20 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 469 | 60.22 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 496 | 60.27 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 522 | 60.31 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 540 | 60.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 541 | 60.35 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 546 | 60.36 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 555 | 60.37 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 587 | 60.42 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 595 | 60.44 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 601 | 60.44 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 9 | NA |
| 614 | 60.48 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 620 | 60.49 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 693 | 60.61 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 704 | 60.64 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 800 | 60.80 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 801 | 60.80 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 806 | 60.82 | atmosphere | 995 | 43200 | < th | dose independent | sin | 7 | NA |
| 813 | 60.83 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 814 | 60.83 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 819 | 60.83 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 825 | 60.85 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 873 | 60.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 927 | 61.02 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 4 |
| 971 | 61.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 990 | 61.17 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |