Os12g0507600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0507600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.56 | 0.247 | 11.7 | -0.849 | 0.467 | 0.96 | -0.353 | -1.28 | -0.348 | 22.9 | 21.15 | 227 | -- | -- |
| 28.54 | 0.249 | 11.7 | -0.609 | 0.502 | 0.868 | -0.228 | -- | -0.282 | 22.4 | 20.42 | 180 | -- | -- |
| 28 | 0.246 | 11.7 | -0.81 | 0.483 | 0.944 | -- | -1.13 | -0.336 | 22.7 | 21.27 | 201 | -- | -- |
| 28.7 | 0.25 | 11.7 | -0.593 | 0.516 | 0.871 | -- | -- | -0.276 | 22.5 | 20.63 | 167 | -- | -- |
| 31.22 | 0.26 | 11.7 | -1.11 | -- | 1.08 | -- | -1.99 | -0.422 | -- | 21.88 | 674 | -- | -- |
| 41.25 | 0.301 | 11.6 | -0.405 | 0.568 | -- | -0.13 | -- | -0.13 | 20.2 | -- | -- | -- | -- |
| 41.3 | 0.301 | 11.6 | -0.401 | 0.569 | -- | -- | -- | -0.13 | 20.2 | -- | -- | -- | -- |
| 34.27 | 0.273 | 11.7 | -0.641 | -- | 0.945 | -- | -- | -0.312 | -- | 21.59 | 639 | -- | -- |
| 37.29 | 0.284 | 11.6 | -- | 0.511 | 0.684 | -- | -- | -0.185 | 21.9 | 21.09 | 167 | -- | -- |
| 59.11 | 0.359 | 11.6 | -0.406 | -- | -- | -- | -- | -0.137 | -- | -- | -- | -- | -- |
| 45.54 | 0.316 | 11.6 | -- | 0.571 | -- | -- | -- | -0.0856 | 20.1 | -- | -- | -- | -- |
| 44.24 | 0.31 | 11.6 | -- | -- | 0.817 | -- | -- | -0.202 | -- | 22.02 | 609 | -- | -- |
| 63.46 | 0.372 | 11.6 | -- | -- | -- | -- | -- | -0.092 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 8 | 27.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 22 | 27.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 30 | 27.81 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 37 | 27.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 57 | 27.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 63 | 27.96 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 64 | 27.96 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 70 | 27.97 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 96 | 28.04 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 103 | 28.05 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 125 | 28.09 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 152 | 28.15 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 507 | 28.53 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 650 | 28.72 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 740 | 28.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 21 |
| 757 | 28.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 790 | 28.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 826 | 28.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 858 | 29.03 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 859 | 29.03 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 961 | 29.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 989 | 29.22 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 4 |