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Os12g0498800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0126) R2 : 0.0817
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.168 (0.0265) R2dN8 : 0.105 R2N8 : 0.0817
σ : 0.237
deviance : 25.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.52 0.218 10.1 -0.202 0.118 -0.155 0.336 -0.0633 -0.131 14 1005 274 -- --
21.54 0.216 10.1 -0.201 0.118 -0.156 0.332 -- -0.129 14 1005 273 -- --
21.95 0.218 10.1 -0.192 0.12 -0.155 -- -0.055 -0.128 14.3 1005 274 -- --
21.96 0.218 10.1 -0.191 0.119 -0.156 -- -- -0.127 14.3 1005 273 -- --
22.79 0.222 10.1 -0.195 -- -0.16 -- -0.05 -0.129 -- 1005 272 -- --
23.27 0.226 10.1 -0.197 0.131 -- 0.347 -- -0.189 14.7 -- -- -- --
23.68 0.228 10.1 -0.189 0.134 -- -- -- -0.187 15.1 -- -- -- --
22.67 0.222 10.1 -0.204 -- -0.155 -- -- -0.115 -- 1006 172 -- --
22.91 0.223 10.1 -- 0.124 -0.155 -- -- -0.104 14.3 1005 308 -- --
24.71 0.232 10.1 -0.194 -- -- -- -- -0.19 -- -- -- -- --
24.62 0.232 10.1 -- 0.138 -- -- -- -0.166 15.1 -- -- -- --
23.65 0.227 10.1 -- -- -0.158 -- -- -0.0975 -- 1006 218 -- --
25.7 0.237 10.1 -- -- -- -- -- -0.168 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.52 atmosphere 1005 270 > th dose independent rect. 15 13
9 20.93 atmosphere 1005 270 < th dose independent rect. 15 16
25 21.05 atmosphere 1005 270 > th dose independent sin 13 NA
30 21.11 wind 5 4320 > th dose independent rect. 14 1
31 21.11 wind 5 4320 < th dose independent rect. 14 1
36 21.12 wind 5 4320 > th dose dependent rect. 15 1
49 21.17 atmosphere 1005 270 > th dose independent rect. 9 20
64 21.25 atmosphere 1005 270 < th dose independent sin 13 NA
75 21.27 atmosphere 1005 30 < th dose independent rect. 14 20
83 21.28 atmosphere 1015 30 < th dose dependent rect. 19 15
84 21.28 radiation 1 30 > th dose dependent rect. 12 23
113 21.32 atmosphere 1005 270 > th dose independent rect. 14 21
129 21.34 radiation 10 30 > th dose independent rect. 12 23
134 21.35 atmosphere 1005 10 < th dose independent rect. 18 16
140 21.36 atmosphere 1005 720 > th dose independent sin 16 NA
144 21.37 atmosphere 1005 270 > th dose independent rect. 22 6
145 21.37 atmosphere 1005 720 < th dose independent rect. 15 10
154 21.37 atmosphere 1015 30 < th dose dependent rect. 12 23
156 21.38 wind 3 720 < th dose independent rect. 2 1
187 21.41 wind 5 4320 < th dose independent rect. 13 6
222 21.44 temperature 30 4320 > th dose independent rect. 13 1
232 21.44 wind 1 10 > th dose independent rect. 12 23
237 21.45 atmosphere 1005 720 > th dose independent rect. 18 3
239 21.45 temperature 30 720 < th dose independent rect. 24 12
240 21.45 radiation 20 14400 < th dose independent rect. 18 12
259 21.47 radiation 1 1440 > th dose independent rect. 12 1
260 21.47 wind 3 720 < th dose independent rect. 24 4
271 21.47 atmosphere 1005 270 > th dose independent rect. 21 22
273 21.47 temperature 25 720 > th dose dependent rect. 22 1
278 21.48 radiation 20 14400 < th dose independent rect. 3 3
280 21.48 humidity 60 14400 > th dose independent rect. 3 5
281 21.48 atmosphere 1005 720 > th dose independent rect. 16 5
312 21.49 wind 9 4320 < th dose dependent rect. 13 2
314 21.50 temperature 30 4320 < th dose independent rect. 13 1
315 21.50 atmosphere 1005 720 > th dose independent rect. 24 1
338 21.51 humidity 60 14400 > th dose independent rect. 1 7
363 21.52 wind 1 14400 < th dose dependent rect. 2 1
365 21.52 wind 5 720 < th dose dependent rect. 24 3
384 21.54 atmosphere 1005 30 < th dose independent sin 11 NA
414 21.55 temperature 30 90 < th dose independent rect. 10 9
442 21.56 temperature 25 270 < th dose independent rect. 16 15
466 21.57 radiation 1 720 < th dose dependent rect. 16 8
471 21.58 atmosphere 1005 270 > th dose independent no NA NA
476 21.58 radiation 1 720 < th dose independent rect. 16 8
497 21.59 temperature 30 720 < th dose independent rect. 7 5
502 21.59 atmosphere 1005 10 > th dose independent rect. 22 8
509 21.59 temperature 30 720 < th dose independent rect. 1 14
520 21.59 wind 5 720 < th dose dependent rect. 24 1
524 21.59 humidity 90 10 < th dose dependent rect. 12 23
533 21.60 atmosphere 1005 10 > th dose independent rect. 24 6
537 21.60 temperature 30 720 < th dose independent rect. 21 16
548 21.61 temperature 30 4320 < th dose independent rect. 11 3
561 21.61 temperature 25 720 > th dose dependent rect. 20 4
563 21.61 radiation 40 720 < th dose dependent rect. 24 10
567 21.62 atmosphere 1005 720 < th dose independent rect. 19 2
568 21.62 temperature 30 720 < th dose independent rect. 9 3
573 21.62 temperature 30 10 < th dose independent rect. 10 9
575 21.62 radiation 30 720 < th dose independent rect. 24 10
590 21.63 temperature 25 720 < th dose independent rect. 16 8
592 21.63 humidity 60 14400 > th dose independent rect. 20 10
601 21.63 atmosphere 1005 30 > th dose independent rect. 15 21
607 21.63 temperature 25 270 > th dose dependent rect. 18 14
624 21.64 temperature 30 270 < th dose independent rect. 23 19
636 21.65 humidity 80 14400 > th dose independent rect. 20 3
638 21.65 radiation 20 14400 < th dose independent rect. 1 5
653 21.65 humidity 80 30 < th dose independent rect. 12 23
654 21.65 temperature 25 4320 > th dose dependent rect. 24 1
658 21.65 atmosphere 1015 30 < th dose dependent rect. 21 13
690 21.67 temperature 30 4320 < th dose independent rect. 7 7
695 21.67 temperature 30 4320 < th dose independent rect. 5 9
698 21.67 temperature 30 4320 < th dose independent rect. 2 12
701 21.67 temperature 30 4320 < th dose independent rect. 22 16
703 21.67 temperature 30 4320 < th dose independent rect. 20 18
721 21.68 temperature 25 720 > th dose independent rect. 16 9
738 21.68 atmosphere 1005 30 > th dose independent rect. 13 23
743 21.68 temperature 25 720 > th dose dependent rect. 18 7
745 21.68 temperature 25 720 > th dose dependent rect. 18 9
780 21.70 radiation 30 720 < th dose independent rect. 9 1
789 21.70 atmosphere 1005 10 > th dose independent rect. 20 10
794 21.70 temperature 30 720 < th dose independent rect. 23 16
807 21.71 wind 1 14400 < th dose independent rect. 2 1
819 21.71 temperature 30 720 > th dose independent rect. 8 6
824 21.71 humidity 60 14400 > th dose independent rect. 23 9
830 21.71 wind 5 4320 < th dose independent rect. 13 12
855 21.72 atmosphere 1005 720 > th dose independent rect. 18 1
881 21.72 radiation 40 720 < th dose dependent rect. 9 1
887 21.72 atmosphere 995 90 > th dose dependent rect. 9 22
923 21.73 wind 1 43200 < th dose dependent rect. 6 1
941 21.74 wind 5 4320 > th dose independent rect. 13 12
975 21.75 temperature 30 720 < th dose independent sin 5 NA
980 21.75 humidity 60 14400 > th dose independent rect. 20 12
984 21.75 temperature 25 270 > th dose independent rect. 17 15