Os12g0498400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Septum formation topological specificity factor MinE family protein.
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Os12g0498400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Septum formation topological specificity factor MinE family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.1 | 0.27 | 10.5 | 0.78 | 0.959 | 1.11 | 0.312 | -2.13 | 0.21 | 17.8 | 25.21 | 781 | -- | -- |
| 34.32 | 0.273 | 10.4 | 1.14 | 1.01 | 0.891 | 0.12 | -- | 0.293 | 17.8 | 25.02 | 795 | -- | -- |
| 33.31 | 0.269 | 10.5 | 0.817 | 0.963 | 1.1 | -- | -1.89 | 0.222 | 17.7 | 25.24 | 783 | -- | -- |
| 34.34 | 0.273 | 10.4 | 1.14 | 0.99 | 0.908 | -- | -- | 0.298 | 17.8 | 25.2 | 784 | -- | -- |
| 55.35 | 0.346 | 10.5 | 0.477 | -- | 1.92 | -- | -3.77 | 0.0593 | -- | 24.78 | 520 | -- | -- |
| 51.67 | 0.337 | 10.4 | 1.35 | 1.26 | -- | 0.399 | -- | 0.362 | 18.4 | -- | -- | -- | -- |
| 52.06 | 0.338 | 10.4 | 1.34 | 1.26 | -- | -- | -- | 0.364 | 18.4 | -- | -- | -- | -- |
| 60.11 | 0.361 | 10.4 | 1.02 | -- | 1.61 | -- | -- | 0.199 | -- | 24.6 | 513 | -- | -- |
| 66.2 | 0.379 | 10.5 | -- | 1.1 | 1.03 | -- | -- | 0.109 | 17.6 | 23.14 | 851 | -- | -- |
| 134.5 | 0.542 | 10.4 | 1.31 | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
| 99.67 | 0.467 | 10.4 | -- | 1.24 | -- | -- | -- | 0.214 | 18.4 | -- | -- | -- | -- |
| 86.46 | 0.433 | 10.5 | -- | -- | 1.77 | -- | -- | 0.0411 | -- | 24.04 | 526 | -- | -- |
| 179.85 | 0.626 | 10.4 | -- | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.62 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 3 | 32.68 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 5 | 32.77 | temperature | 25 | 720 | > th | dose dependent | sin | 20 | NA |
| 8 | 32.84 | temperature | 25 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 59 | 33.10 | temperature | 25 | 720 | > th | dose dependent | rect. | 10 | 10 |
| 99 | 33.24 | temperature | 25 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 118 | 33.30 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 122 | 33.31 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 293 | 34.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 301 | 34.53 | temperature | 30 | 720 | > th | dose independent | sin | 14 | NA |
| 329 | 34.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 14 |
| 338 | 34.73 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 6 |
| 391 | 34.85 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 15 |
| 410 | 34.93 | temperature | 30 | 720 | < th | dose independent | sin | 14 | NA |
| 456 | 35.02 | temperature | 30 | 720 | < th | dose independent | rect. | 13 | 8 |
| 472 | 35.05 | temperature | 30 | 720 | < th | dose independent | rect. | 13 | 16 |
| 481 | 35.06 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 482 | 35.06 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 526 | 35.13 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 10 |
| 563 | 35.20 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 19 |
| 578 | 35.22 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 7 |
| 607 | 35.27 | radiation | 20 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 626 | 35.28 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 765 | 35.45 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 781 | 35.46 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 835 | 35.52 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 879 | 35.57 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 903 | 35.61 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 909 | 35.62 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 916 | 35.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 926 | 35.64 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 942 | 35.66 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 953 | 35.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 955 | 35.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 12 |