Os12g0481400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR disease resistance protein homologue (Fragment).
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Os12g0481400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR disease resistance protein homologue (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.1 | 0.349 | 2.86 | -0.165 | 0.0654 | 0.152 | -0.248 | -0.445 | -0.0243 | 10.9 | 90.33 | 34 | -- | -- |
| 55.82 | 0.348 | 2.85 | -0.221 | 0.101 | 0.183 | 0.184 | -- | -0.0186 | 14 | 90.01 | 42 | -- | -- |
| 55.28 | 0.346 | 2.85 | -0.172 | 0.0842 | 0.172 | -- | -0.334 | -0.0163 | 11.6 | 90.74 | 39 | -- | -- |
| 55.91 | 0.348 | 2.85 | -0.217 | 0.0956 | 0.167 | -- | -- | -0.0257 | 12.9 | 90.5 | 42 | -- | -- |
| 55.58 | 0.347 | 2.86 | -0.18 | -- | 0.14 | -- | -0.365 | -0.0293 | -- | 90 | 43 | -- | -- |
| 57.02 | 0.354 | 2.86 | -0.183 | 0.0664 | -- | -0.316 | -- | -0.0679 | 6.71 | -- | -- | -- | -- |
| 57.27 | 0.354 | 2.86 | -0.188 | 0.0653 | -- | -- | -- | -0.0669 | 7.03 | -- | -- | -- | -- |
| 56.33 | 0.35 | 2.85 | -0.21 | -- | 0.124 | -- | -- | -0.0373 | -- | 90.68 | 43 | -- | -- |
| 57.1 | 0.352 | 2.85 | -- | 0.0886 | 0.148 | -- | -- | -0.00658 | 12.6 | 90.26 | 43 | -- | -- |
| 57.49 | 0.354 | 2.86 | -0.187 | -- | -- | -- | -- | -0.0657 | -- | -- | -- | -- | -- |
| 58.2 | 0.357 | 2.85 | -- | 0.0633 | -- | -- | -- | -0.0459 | 7.22 | -- | -- | -- | -- |
| 57.49 | 0.353 | 2.85 | -- | -- | 0.11 | -- | -- | -0.0174 | -- | 90.43 | 43 | -- | -- |
| 58.42 | 0.357 | 2.86 | -- | -- | -- | -- | -- | -0.0449 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.83 | temperature | 20 | 30 | < th | dose independent | rect. | 7 | 1 |
| 4 | 41.83 | temperature | 20 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 13 | 43.41 | radiation | 1 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 30 | 45.82 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 16 |
| 41 | 47.04 | humidity | 90 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 70 | 47.70 | radiation | 1 | 90 | < th | dose independent | rect. | 6 | 1 |
| 73 | 47.82 | radiation | 1 | 90 | < th | dose independent | rect. | 6 | 5 |
| 157 | 50.28 | humidity | 90 | 10 | > th | dose independent | rect. | 7 | 1 |
| 166 | 50.35 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 7 | 1 |
| 183 | 50.43 | humidity | 90 | 90 | > th | dose independent | rect. | 6 | 5 |
| 232 | 51.21 | temperature | 20 | 90 | < th | dose independent | rect. | 6 | 5 |
| 242 | 51.41 | humidity | 90 | 30 | > th | dose independent | rect. | 7 | 16 |
| 276 | 51.79 | humidity | 90 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 280 | 51.83 | humidity | 90 | 30 | > th | dose dependent | sin | 22 | NA |
| 331 | 52.39 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 20 | 1 |
| 381 | 52.78 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 388 | 52.79 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 443 | 53.08 | temperature | 25 | 90 | < th | dose dependent | rect. | 6 | 5 |
| 460 | 53.19 | radiation | 20 | 30 | < th | dose independent | rect. | 7 | 1 |
| 475 | 53.26 | humidity | 90 | 90 | > th | dose dependent | rect. | 11 | 11 |
| 640 | 53.76 | temperature | 20 | 90 | < th | dose independent | rect. | 6 | 10 |
| 651 | 53.78 | humidity | 90 | 10 | > th | dose independent | sin | 0 | NA |
| 683 | 53.84 | humidity | 90 | 10 | > th | dose independent | rect. | 4 | 8 |
| 845 | 54.14 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 11 |
| 856 | 54.16 | humidity | 90 | 10 | < th | dose independent | sin | 1 | NA |
| 884 | 54.20 | humidity | 90 | 90 | > th | dose independent | rect. | 21 | 1 |
| 914 | 54.23 | humidity | 90 | 10 | > th | dose independent | rect. | 22 | 1 |
| 958 | 54.29 | wind | 5 | 10 | < th | dose independent | rect. | 7 | 1 |