Os12g0481200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0481200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.04 | 0.495 | 8 | -0.477 | 0.124 | 0.15 | 0.216 | 5.59 | -0.415 | 12.6 | 30 | 665 | -- | -- |
| 112.79 | 0.495 | 8.04 | -0.937 | 0.144 | 0.766 | 0.274 | -- | -0.383 | 11.3 | 30.4 | 670 | -- | -- |
| 111.21 | 0.491 | 8 | -0.478 | 0.122 | 0.161 | -- | 5.59 | -0.415 | 12.2 | 30.04 | 656 | -- | -- |
| 112.26 | 0.493 | 8.06 | -1 | 0.117 | 0.765 | -- | -- | -0.434 | 12.2 | 30.38 | 644 | -- | -- |
| 112.08 | 0.493 | 8.01 | -0.492 | -- | 0.151 | -- | 5.55 | -0.42 | -- | 30.03 | 643 | -- | -- |
| 123.85 | 0.522 | 8.08 | -0.896 | 0.216 | -- | 0.729 | -- | -0.506 | 17.2 | -- | -- | -- | -- |
| 125.14 | 0.524 | 8.08 | -0.896 | 0.221 | -- | -- | -- | -0.502 | 16.8 | -- | -- | -- | -- |
| 113.14 | 0.495 | 8.06 | -1 | -- | 0.763 | -- | -- | -0.437 | -- | 30.36 | 637 | -- | -- |
| 138.19 | 0.548 | 8.04 | -- | 0.119 | 0.642 | -- | -- | -0.349 | 12.2 | 33 | 655 | -- | -- |
| 127.72 | 0.528 | 8.08 | -0.904 | -- | -- | -- | -- | -0.508 | -- | -- | -- | -- | -- |
| 146.3 | 0.566 | 8.06 | -- | 0.237 | -- | -- | -- | -0.403 | 16.7 | -- | -- | -- | -- |
| 139.08 | 0.549 | 8.04 | -- | -- | 0.629 | -- | -- | -0.348 | -- | 32.98 | 652 | -- | -- |
| 149.29 | 0.57 | 8.06 | -- | -- | -- | -- | -- | -0.408 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.49 | humidity | 70 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 10 | 104.78 | humidity | 90 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 36 | 105.02 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 50 | 105.13 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 56 | 105.15 | humidity | 60 | 14400 | > th | dose dependent | rect. | 7 | 12 |
| 62 | 105.20 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 78 | 105.25 | humidity | 80 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 126 | 105.40 | humidity | 60 | 14400 | > th | dose dependent | sin | 22 | NA |
| 161 | 105.47 | humidity | 80 | 14400 | < th | dose independent | rect. | 7 | 15 |
| 192 | 105.51 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 227 | 105.57 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 16 |
| 233 | 105.58 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 237 | 105.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 259 | 105.61 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 260 | 105.61 | humidity | 80 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 391 | 105.77 | humidity | 90 | 14400 | < th | dose dependent | sin | 20 | NA |
| 414 | 105.79 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 453 | 105.84 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 483 | 105.87 | humidity | 80 | 14400 | < th | dose independent | sin | 21 | NA |
| 622 | 106.00 | humidity | 80 | 14400 | > th | dose independent | sin | 21 | NA |
| 842 | 106.18 | humidity | 50 | 14400 | > th | dose dependent | rect. | 21 | 22 |
| 967 | 106.29 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 986 | 106.31 | humidity | 50 | 14400 | > th | dose dependent | no | NA | NA |