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Os12g0480000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, DHHC-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.47 (0.0243) R2 : 0.216
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.659 (0.0601) R2dC : 0.208 R2C : 0.203
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.123 (0.051) R2dN8 : 0.013 R2N8 : 0.00816
σ : 0.457
deviance : 95.39
__
_____
C
peak time of C : 9.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.71 0.403 5.53 0.335 0.669 -2.56 -0.252 6.77 0.0175 9.3 0.09648 1490 -- --
83.74 0.426 5.46 0.648 0.648 -1.13 0.0983 -- 0.0267 9.71 0.2223 432 -- --
73.9 0.4 5.53 0.314 0.671 -2.56 -- 6.8 0.0177 9.29 0.2238 1545 -- --
79.22 0.415 5.45 0.418 0.664 -0.674 -- -- -0.0349 9.35 0.4563 2241 -- --
100.05 0.466 5.54 0.341 -- -2.57 -- 6.81 0.0239 -- 0.5 1444 -- --
84.63 0.431 5.45 0.641 0.658 -- -0.238 -- -0.0524 9.28 -- -- -- --
84.83 0.431 5.45 0.633 0.659 -- -- -- -0.0527 9.28 -- -- -- --
104.39 0.476 5.46 0.446 -- -0.607 -- -- -0.01 -- 1 2581 -- --
83.46 0.425 5.45 -- 0.672 -0.86 -- -- -0.0412 9.34 0.6134 2241 -- --
110.11 0.49 5.47 0.63 -- -- -- -- -0.0498 -- -- -- -- --
95.39 0.457 5.47 -- 0.659 -- -- -- -0.123 9.2 -- -- -- --
108.99 0.486 5.47 -- -- -0.821 -- -- -0.043 -- 0.5372 2448 -- --
120.58 0.513 5.48 -- -- -- -- -- -0.12 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.39 precipitation 0.1 1440 > th dose dependent rect. 5 6
3 70.50 precipitation 0.1 1440 > th dose independent rect. 5 6
9 71.06 temperature 15.0 720 > th dose independent rect. 16 20
10 71.27 temperature 15.0 720 > th dose independent rect. 15 22
11 71.30 temperature 15.0 720 > th dose independent rect. 24 21
12 71.42 temperature 15.0 270 > th dose independent rect. 23 13
16 71.50 humidity 70.0 1440 > th dose dependent rect. 9 3
23 71.73 precipitation 0.1 1440 < th dose independent rect. 5 8
25 71.73 precipitation 0.1 1440 < th dose dependent rect. 5 8
33 72.33 humidity 90.0 1440 > th dose independent rect. 9 5
39 72.62 humidity 90.0 720 < th dose independent rect. 9 3
41 72.66 temperature 15.0 720 > th dose independent rect. 9 10
45 72.75 precipitation 0.1 1440 > th dose independent rect. 21 6
46 72.75 precipitation 0.1 1440 > th dose dependent rect. 21 6
49 72.78 temperature 25.0 10 < th dose dependent rect. 5 19
51 72.79 atmosphere 1015.0 720 < th dose independent rect. 24 4
53 72.79 precipitation 0.1 1440 < th dose independent rect. 1 13
54 72.79 precipitation 0.1 1440 < th dose independent rect. 19 19
55 72.79 precipitation 0.1 1440 < th dose dependent rect. 1 13
56 72.79 precipitation 0.1 1440 < th dose dependent rect. 19 19
57 72.80 precipitation 0.1 1440 < th dose independent rect. 5 6
58 72.80 precipitation 0.1 1440 < th dose independent rect. 23 15
59 72.80 precipitation 0.1 1440 < th dose dependent rect. 5 6
60 72.80 precipitation 0.1 1440 < th dose dependent rect. 23 15
63 72.84 temperature 15.0 720 > th dose independent rect. 1 11
81 72.91 radiation 1.0 720 > th dose independent rect. 7 6
84 72.94 humidity 80.0 1440 > th dose independent rect. 9 3
89 72.94 precipitation 0.1 1440 > th dose dependent rect. 20 18
92 72.96 temperature 15.0 720 > th dose independent rect. 9 19
98 72.98 precipitation 0.1 1440 > th dose dependent sin 4 NA
101 72.98 precipitation 0.1 1440 > th dose dependent rect. 23 15
104 72.99 precipitation 0.1 1440 > th dose independent rect. 19 19
106 73.00 precipitation 0.1 1440 > th dose independent rect. 24 14
120 73.05 atmosphere 1015.0 720 < th dose independent rect. 24 13
121 73.05 temperature 15.0 270 > th dose independent rect. 6 22
136 73.09 precipitation 0.1 1440 > th dose independent sin 4 NA
137 73.09 precipitation 0.1 1440 < th dose independent sin 3 NA
140 73.09 precipitation 0.1 1440 < th dose independent rect. 21 17
141 73.09 precipitation 0.1 1440 < th dose dependent sin 3 NA
144 73.09 precipitation 0.1 1440 < th dose dependent rect. 21 17
149 73.11 precipitation 0.1 1440 > th dose independent rect. 18 17
184 73.24 precipitation 0.1 1440 < th dose independent rect. 5 2
187 73.24 precipitation 0.1 1440 < th dose dependent rect. 5 2
216 73.32 precipitation 0.1 1440 > th dose dependent rect. 19 16
218 73.33 temperature 15.0 720 > th dose independent rect. 3 22
248 73.41 precipitation 0.1 1440 < th dose independent rect. 19 16
251 73.41 precipitation 0.1 1440 < th dose dependent rect. 19 16
253 73.42 atmosphere 1015.0 720 < th dose independent rect. 1 2
254 73.43 precipitation 0.1 1440 < th dose independent sin 11 NA
255 73.43 precipitation 0.1 1440 > th dose independent rect. 24 11
261 73.43 precipitation 0.1 1440 < th dose dependent sin 11 NA
264 73.44 precipitation 0.1 1440 > th dose independent sin 11 NA
268 73.44 precipitation 0.1 1440 > th dose dependent sin 9 NA
333 73.55 precipitation 0.1 1440 > th dose independent rect. 1 2
336 73.55 temperature 15.0 720 > th dose independent rect. 19 14
337 73.55 precipitation 0.1 1440 > th dose dependent rect. 1 2
354 73.59 radiation 20.0 4320 < th dose independent rect. 21 9
358 73.60 atmosphere 1015.0 720 < th dose independent rect. 24 19
395 73.66 precipitation 0.1 1440 < th dose independent rect. 21 7
398 73.66 precipitation 0.1 1440 < th dose dependent rect. 21 7
402 73.67 precipitation 0.1 1440 < th dose independent rect. 19 12
405 73.67 precipitation 0.1 1440 < th dose independent rect. 9 22
406 73.67 precipitation 0.1 1440 < th dose dependent rect. 19 12
410 73.67 precipitation 0.1 1440 < th dose dependent rect. 9 22
413 73.68 precipitation 0.1 1440 < th dose independent rect. 1 10
419 73.68 precipitation 0.1 1440 < th dose dependent rect. 1 10
420 73.68 precipitation 0.1 1440 > th dose dependent rect. 23 12
424 73.69 precipitation 0.1 1440 > th dose independent rect. 13 22
434 73.70 atmosphere 1015.0 4320 > th dose dependent rect. 7 11
453 73.73 radiation 20.0 4320 < th dose independent rect. 2 4
461 73.73 atmosphere 1015.0 4320 > th dose dependent rect. 6 13
477 73.75 precipitation 0.1 1440 < th dose independent rect. 21 23
479 73.75 precipitation 0.1 1440 < th dose dependent rect. 21 23
484 73.76 precipitation 0.1 1440 < th dose independent rect. 1 23
485 73.76 precipitation 0.1 1440 < th dose independent rect. 12 23
486 73.76 precipitation 0.1 1440 < th dose independent rect. 23 23
490 73.76 precipitation 0.1 1440 < th dose dependent rect. 1 23
491 73.76 precipitation 0.1 1440 < th dose dependent rect. 12 23
492 73.76 precipitation 0.1 1440 < th dose dependent rect. 23 23
502 73.78 precipitation 0.1 1440 > th dose independent no NA NA
503 73.78 precipitation 0.1 1440 < th dose independent no NA NA
509 73.78 precipitation 0.1 1440 < th dose dependent no NA NA
516 73.79 precipitation 0.1 1440 > th dose independent rect. 9 23
522 73.80 precipitation 0.1 1440 > th dose independent rect. 22 23
534 73.82 precipitation 0.1 1440 > th dose independent rect. 5 23
539 73.83 radiation 1.0 1440 < th dose independent rect. 7 5
543 73.83 radiation 1.0 1440 < th dose dependent rect. 7 5
583 73.87 precipitation 0.1 1440 < th dose independent rect. 1 21
590 73.87 precipitation 0.1 1440 < th dose dependent rect. 1 21
592 73.88 precipitation 0.1 1440 > th dose independent rect. 19 13
599 73.88 atmosphere 1015.0 4320 > th dose dependent sin 0 NA
607 73.89 temperature 15.0 720 > th dose independent rect. 7 6
629 73.91 temperature 15.0 720 > th dose independent rect. 15 14
650 73.92 precipitation 0.1 14400 > th dose dependent rect. 19 1
670 73.94 temperature 15.0 720 > th dose independent rect. 1 2
691 73.97 precipitation 0.1 1440 > th dose independent rect. 3 23
694 73.97 atmosphere 1015.0 4320 > th dose dependent rect. 9 6
699 73.98 temperature 15.0 720 > th dose independent rect. 21 10
700 73.98 atmosphere 1015.0 4320 > th dose independent rect. 6 14
718 74.00 atmosphere 1015.0 4320 > th dose independent rect. 7 12
725 74.01 precipitation 0.1 1440 < th dose independent rect. 1 2
732 74.01 precipitation 0.1 1440 < th dose dependent rect. 1 2
754 74.03 temperature 15.0 1440 > th dose independent rect. 6 4
768 74.04 atmosphere 1015.0 4320 < th dose independent rect. 7 13
770 74.04 temperature 15.0 90 > th dose independent rect. 9 20
784 74.06 precipitation 0.1 1440 < th dose independent rect. 1 6
789 74.06 precipitation 0.1 1440 < th dose dependent rect. 1 6
796 74.07 radiation 1.0 720 > th dose independent rect. 17 19
808 74.08 precipitation 0.1 1440 < th dose independent rect. 3 23
812 74.08 precipitation 0.1 1440 < th dose dependent rect. 3 23
834 74.11 atmosphere 1015.0 4320 > th dose independent rect. 9 8
835 74.11 precipitation 0.1 1440 < th dose independent rect. 23 8
837 74.11 precipitation 0.1 1440 < th dose dependent rect. 23 8
863 74.14 atmosphere 1015.0 4320 < th dose independent rect. 9 8
876 74.16 temperature 15.0 720 > th dose independent rect. 24 4
903 74.17 humidity 90.0 720 > th dose dependent rect. 7 14
918 74.19 humidity 90.0 1440 < th dose dependent rect. 9 2
939 74.22 precipitation 0.1 1440 < th dose independent rect. 21 10
944 74.22 precipitation 0.1 1440 < th dose dependent rect. 21 10
945 74.23 atmosphere 1015.0 4320 > th dose independent sin 23 NA
976 74.26 precipitation 0.1 1440 < th dose independent rect. 12 19
980 74.26 precipitation 0.1 1440 < th dose dependent rect. 12 19
995 74.28 precipitation 0.1 14400 > th dose independent rect. 19 1