Os12g0477400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os12g0477400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.1 | 0.379 | 9.99 | 1.24 | 0.64 | 1.1 | -0.564 | 1.17 | 0.35 | 4.93 | 30.42 | 90 | -- | -- |
| 66.53 | 0.38 | 9.98 | 1.45 | 0.66 | 1.19 | -0.223 | -- | 0.363 | 4.92 | 32.56 | 70 | -- | -- |
| 65.81 | 0.378 | 9.99 | 1.25 | 0.631 | 1.07 | -- | 1.06 | 0.343 | 5.01 | 30.34 | 80 | -- | -- |
| 66.49 | 0.38 | 9.97 | 1.45 | 0.646 | 1.14 | -- | -- | 0.392 | 5.14 | 31.3 | 71 | -- | -- |
| 81.46 | 0.42 | 9.99 | 1.37 | -- | 1.68 | -- | 1.25 | 0.435 | -- | 31.49 | 143 | -- | -- |
| 82.19 | 0.425 | 10 | 1.17 | 0.973 | -- | -0.098 | -- | 0.198 | 4.33 | -- | -- | -- | -- |
| 82.21 | 0.425 | 10 | 1.17 | 0.972 | -- | -- | -- | 0.198 | 4.33 | -- | -- | -- | -- |
| 82.52 | 0.423 | 9.96 | 1.58 | -- | 1.74 | -- | -- | 0.482 | -- | 32.61 | 132 | -- | -- |
| 114.51 | 0.501 | 10 | -- | 0.858 | 0.511 | -- | -- | 0.144 | 4.69 | 31.3 | 71 | -- | -- |
| 133.06 | 0.539 | 10 | 1.21 | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
| 118.17 | 0.509 | 10 | -- | 0.994 | -- | -- | -- | 0.0682 | 4.31 | -- | -- | -- | -- |
| 143.55 | 0.558 | 10 | -- | -- | 1.35 | -- | -- | 0.237 | -- | 52.66 | 131 | -- | -- |
| 171.47 | 0.611 | 10 | -- | -- | -- | -- | -- | 0.0902 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.32 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 4 | 56.73 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 5 | 57.00 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 6 | 57.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 53 | 59.83 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 181 | 63.08 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 189 | 63.21 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 216 | 63.64 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 11 |
| 224 | 63.80 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 247 | 64.03 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 21 |
| 263 | 64.16 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 19 |
| 267 | 64.18 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 320 | 64.59 | temperature | 25.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 321 | 64.59 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 333 | 64.68 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 3 |
| 341 | 64.73 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 345 | 64.75 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 348 | 64.78 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 359 | 64.80 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 403 | 64.96 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 423 | 65.02 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 425 | 65.02 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 431 | 65.04 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 434 | 65.06 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 435 | 65.06 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 449 | 65.11 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 477 | 65.22 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 488 | 65.27 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 600 | 65.62 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 614 | 65.65 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 621 | 65.70 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 631 | 65.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 10 | 13 |
| 645 | 65.84 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 646 | 65.85 | temperature | 20.0 | 10 | > th | dose dependent | no | NA | NA |
| 653 | 65.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 705 | 65.98 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 712 | 66.01 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 759 | 66.10 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 763 | 66.11 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 780 | 66.20 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 831 | 66.43 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 844 | 66.49 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 853 | 66.53 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 881 | 66.61 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 889 | 66.64 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 890 | 66.64 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 905 | 66.69 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 908 | 66.70 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 951 | 66.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 955 | 66.82 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 956 | 66.82 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 987 | 66.91 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 997 | 66.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 2 |