Os12g0468600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Metallo-dependent hydrolase, composite domain containing protein.
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Os12g0468600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Metallo-dependent hydrolase, composite domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.43 | 0.246 | 10.5 | -0.319 | 0.565 | 0.401 | -0.0875 | 3.06 | 0.196 | 0.839 | 0.8304 | 4229 | -- | -- |
| 29.39 | 0.253 | 10.4 | 0.21 | 0.513 | 0.375 | -0.433 | -- | 0.441 | 0.997 | 21.62 | 20310 | -- | -- |
| 27.43 | 0.244 | 10.5 | -0.314 | 0.565 | 0.406 | -- | 3.12 | 0.199 | 0.784 | 0.8 | 4214 | -- | -- |
| 30.05 | 0.255 | 10.4 | 0.2 | 0.514 | 0.373 | -- | -- | 0.433 | 0.988 | 55.13 | 20320 | -- | -- |
| 38.49 | 0.291 | 10.4 | 0.28 | -- | 0.335 | -- | -0.328 | 0.32 | -- | 2.05 | 6113 | -- | -- |
| 34.35 | 0.275 | 10.4 | 0.234 | 0.505 | -- | -0.463 | -- | 0.299 | 0.938 | -- | -- | -- | -- |
| 35.25 | 0.278 | 10.4 | 0.251 | 0.506 | -- | -- | -- | 0.301 | 0.965 | -- | -- | -- | -- |
| 35.01 | 0.277 | 10.4 | 0.272 | -- | 0.65 | -- | -- | 0.305 | -- | 55.13 | 20320 | -- | -- |
| 30.94 | 0.259 | 10.4 | -- | 0.518 | 0.402 | -- | -- | 0.425 | 1.01 | 148.9 | 20320 | -- | -- |
| 51.19 | 0.334 | 10.4 | 0.27 | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
| 36.92 | 0.284 | 10.4 | -- | 0.51 | -- | -- | -- | 0.273 | 0.986 | -- | -- | -- | -- |
| 36.97 | 0.284 | 10.4 | -- | -- | 0.65 | -- | -- | 0.274 | -- | 55.13 | 20320 | -- | -- |
| 53.11 | 0.34 | 10.4 | -- | -- | -- | -- | -- | 0.281 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 2 | 24.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 3 | 24.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 4 | 24.82 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 11 | 25.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 25 | 25.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 26 | 25.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 6 |
| 27 | 25.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 29 | 25.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 30 | 25.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 31 | 25.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 36 | 25.41 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 44 | 25.44 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 47 | 25.46 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 50 | 25.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 54 | 25.54 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 55 | 25.54 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 56 | 25.54 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 100 | 25.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 104 | 25.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 109 | 26.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 111 | 26.02 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 113 | 26.02 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 117 | 26.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 119 | 26.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 120 | 26.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 121 | 26.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 129 | 26.09 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 134 | 26.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 136 | 26.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 139 | 26.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 141 | 26.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 147 | 26.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 157 | 26.22 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 158 | 26.22 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 159 | 26.22 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 172 | 26.26 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 175 | 26.27 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 176 | 26.27 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 183 | 26.29 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 211 | 26.35 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 249 | 26.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 252 | 26.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 273 | 26.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 303 | 26.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 306 | 26.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 317 | 26.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 320 | 26.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 344 | 26.49 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 364 | 26.50 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 458 | 26.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 463 | 26.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 524 | 26.61 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 572 | 26.64 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 611 | 26.66 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 641 | 26.67 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 811 | 26.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 848 | 26.75 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 850 | 26.75 | temperature | 10.0 | 14400 | > th | dose dependent | no | NA | NA |
| 885 | 26.75 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 918 | 26.77 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 919 | 26.77 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 924 | 26.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 958 | 26.78 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 962 | 26.78 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 964 | 26.78 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |