Os12g0467700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase domain containing protein.
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Os12g0467700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 306.24 | 0.822 | 8.86 | 1.73 | 1.16 | 1.49 | 1.94 | 2.49 | -0.535 | 8.39 | 1011 | 9243 | -- | -- |
| 321.58 | 0.835 | 8.8 | 2.56 | 1.15 | 1.48 | 1.84 | -- | -0.361 | 8.42 | 1010 | 9731 | -- | -- |
| 316.31 | 0.828 | 8.85 | 1.78 | 1.19 | 1.46 | -- | 2.38 | -0.527 | 7.9 | 1011 | 9557 | -- | -- |
| 331.5 | 0.848 | 8.78 | 2.6 | 1.18 | 1.44 | -- | -- | -0.376 | 7.98 | 1010 | 9722 | -- | -- |
| 391.97 | 0.922 | 8.88 | 1.81 | -- | 1.48 | -- | 2.48 | -0.53 | -- | 1011 | 9202 | -- | -- |
| 399.97 | 0.938 | 8.87 | 2.03 | 1.14 | -- | 2.02 | -- | -0.776 | 8.68 | -- | -- | -- | -- |
| 411.85 | 0.95 | 8.87 | 2.08 | 1.16 | -- | -- | -- | -0.78 | 8.14 | -- | -- | -- | -- |
| 408.08 | 0.941 | 8.81 | 2.63 | -- | 1.44 | -- | -- | -0.365 | -- | 1010 | 9329 | -- | -- |
| 496.28 | 1.04 | 8.85 | -- | 1.15 | 0.854 | -- | -- | -0.726 | 8.13 | 1011 | 15081 | -- | -- |
| 485.55 | 1.03 | 8.9 | 2.09 | -- | -- | -- | -- | -0.767 | -- | -- | -- | -- | -- |
| 526.35 | 1.07 | 8.92 | -- | 1.17 | -- | -- | -- | -1.01 | 8.01 | -- | -- | -- | -- |
| 571.35 | 1.11 | 8.88 | -- | -- | 0.889 | -- | -- | -0.708 | -- | 1011 | 15081 | -- | -- |
| 601.21 | 1.14 | 8.95 | -- | -- | -- | -- | -- | -0.999 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 294.13 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 5 | 295.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 7 | 296.18 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 16 | 299.13 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 10 | 19 |
| 39 | 303.48 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 50 | 304.63 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 51 | 304.77 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 53 | 304.81 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 10 | 21 |
| 54 | 304.88 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 60 | 305.10 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 21 |
| 61 | 305.13 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 9 |
| 62 | 305.23 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 63 | 305.23 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 9 |
| 69 | 305.33 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 9 |
| 74 | 305.36 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 80 | 305.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 21 |
| 81 | 305.40 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 89 | 305.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 100 | 305.62 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 114 | 305.77 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 115 | 305.77 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 117 | 305.79 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 125 | 305.85 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 131 | 305.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 10 | 17 |
| 141 | 305.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 149 | 305.97 | radiation | 20.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 173 | 306.08 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 17 | NA |
| 181 | 306.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 185 | 306.11 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 17 | NA |
| 186 | 306.11 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 17 | NA |
| 206 | 306.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 211 | 306.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 11 |
| 214 | 306.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 215 | 306.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 14 |
| 218 | 306.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 14 |
| 234 | 306.22 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 308 | 306.38 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 330 | 306.41 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 332 | 306.41 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 21 |
| 343 | 306.43 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 14 | NA |
| 348 | 306.44 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 357 | 306.45 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 380 | 306.48 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 412 | 306.50 | radiation | 10.0 | 14400 | < th | dose independent | no | NA | NA |
| 428 | 306.50 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 436 | 306.51 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 497 | 306.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 22 |
| 533 | 306.62 | precipitation | 0.1 | 43200 | > th | dose dependent | no | NA | NA |
| 534 | 306.64 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 571 | 306.72 | radiation | 30.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 594 | 306.79 | radiation | 40.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 604 | 306.83 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 609 | 306.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 17 |
| 624 | 306.89 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 10 | 11 |
| 672 | 307.02 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 694 | 307.08 | radiation | 1.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 757 | 307.21 | radiation | 10.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 764 | 307.21 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 12 | 21 |
| 783 | 307.25 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 11 |
| 793 | 307.26 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 16 |
| 804 | 307.28 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 813 | 307.28 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 915 | 307.46 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 972 | 307.53 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |