Os12g0453500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0453500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.69 | 0.277 | -401 | -1860 | 0.0584 | -186000 | -0.0888 | -859000 | 0.0561 | 7.01 | 11.49 | 106 | -- | -- |
| 27996838381.66 | 7790 | -317 | -1860 | 21.6 | -168000 | -34.2 | -- | 13.1 | 12.6 | 10.4 | 6 | -- | -- |
| 34.69 | 0.274 | -401 | -1860 | 0.0633 | -186000 | -- | -859000 | 0.0529 | 6.13 | 11.48 | 108 | -- | -- |
| 22678814300.81 | 7010 | -233 | -1860 | 21.7 | -151000 | -- | -- | 45 | 15.5 | 10.89 | 105 | -- | -- |
| 34.9 | 0.275 | -401 | -1860 | -- | -186000 | -- | -859000 | 0.0543 | -- | 11.44 | 114 | -- | -- |
| 44.09 | 0.311 | 2.81 | 0.0102 | 0.0491 | -- | -0.102 | -- | 0.0422 | 8.65 | -- | -- | -- | -- |
| 44.11 | 0.311 | 2.81 | 0.00633 | 0.0524 | -- | -- | -- | 0.0418 | 7.64 | -- | -- | -- | -- |
| 18289146712.92 | 6300 | -295 | -1790 | -- | -135000 | -- | -- | -763 | -- | 10.85 | 105 | -- | -- |
| 18411856024.42 | 6320 | -194 | -- | 166 | -136000 | -- | -- | 61.4 | 16.1 | 10.6 | 18 | -- | -- |
| 44.26 | 0.311 | 2.81 | 0.00705 | -- | -- | -- | -- | 0.0426 | -- | -- | -- | -- | -- |
| 44.11 | 0.311 | 2.81 | -- | 0.0525 | -- | -- | -- | 0.0411 | 7.63 | -- | -- | -- | -- |
| 14806474522.14 | 5670 | 296 | -- | -- | -122000 | -- | -- | -811 | -- | 9.6 | 6 | -- | -- |
| 44.26 | 0.311 | 2.81 | -- | -- | -- | -- | -- | 0.0418 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.68 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 13 | 34.68 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 67 | 38.53 | radiation | 10 | 10 | < th | dose independent | rect. | 14 | 1 |
| 71 | 38.75 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 7 |
| 118 | 39.54 | wind | 9 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 125 | 39.64 | humidity | 50 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 126 | 39.65 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 21 |
| 182 | 40.05 | humidity | 50 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 277 | 40.40 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 281 | 40.44 | wind | 9 | 270 | > th | dose dependent | sin | 4 | NA |
| 293 | 40.46 | atmosphere | 1015 | 90 | < th | dose independent | rect. | 7 | 23 |
| 324 | 40.52 | humidity | 50 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 343 | 40.54 | humidity | 50 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 349 | 40.56 | humidity | 50 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 350 | 40.56 | humidity | 50 | 1440 | > th | dose independent | rect. | 1 | 14 |
| 355 | 40.56 | humidity | 50 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 357 | 40.57 | wind | 9 | 270 | > th | dose independent | sin | 4 | NA |
| 358 | 40.57 | humidity | 50 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 370 | 40.59 | wind | 9 | 270 | < th | dose independent | sin | 4 | NA |
| 418 | 40.64 | humidity | 50 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 427 | 40.65 | wind | 1 | 90 | < th | dose independent | rect. | 6 | 1 |
| 468 | 40.70 | radiation | 20 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 478 | 40.73 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 1 |
| 481 | 40.73 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 489 | 40.75 | humidity | 50 | 1440 | < th | dose dependent | sin | 6 | NA |
| 539 | 40.89 | humidity | 50 | 1440 | < th | dose independent | sin | 7 | NA |
| 697 | 41.10 | humidity | 50 | 1440 | > th | dose independent | sin | 7 | NA |
| 700 | 41.10 | humidity | 50 | 1440 | < th | dose dependent | no | NA | NA |