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Os12g0451400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.29 (0.0231) R2 : 0.688
β1 : 2.24 (0.0847) R2dD : 0.498 R2D : 0.378
β2 : 1 (0.0604) R2dC : 0.189 R2C : 0.14
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.605 (0.0494) R2dN8 : 0.138 R2N8 : 0.011
σ : 0.435
deviance : 86.24
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.45 0.403 9.32 1.9 1 -1.4 -0.216 0.069 0.476 17.7 19.24 1988 -- --
73.45 0.399 9.31 1.9 1 -1.42 -0.212 -- 0.477 17.7 19.2 1995 -- --
73.56 0.399 9.32 1.9 0.999 -1.4 -- 0.0616 0.475 17.7 19.23 1996 -- --
73.56 0.399 9.31 1.9 0.999 -1.41 -- -- 0.475 17.7 19.2 2010 -- --
109.99 0.488 9.32 1.8 -- -1.18 -- 1.43 0.403 -- 33.01 355 -- --
86.11 0.435 9.29 2.24 1 -- -0.23 -- 0.606 17.8 -- -- -- --
86.24 0.435 9.29 2.24 1 -- -- -- 0.605 17.8 -- -- -- --
111.62 0.492 9.33 1.92 -- -1.23 -- -- 0.351 -- 30.43 335 -- --
102.79 0.472 9.43 -- 1 -1.83 -- -- -0.0179 17.7 20.05 47520 -- --
138.13 0.549 9.27 2.21 -- -- -- -- 0.581 -- -- -- -- --
218.87 0.692 9.34 -- 0.966 -- -- -- 0.355 17.9 -- -- -- --
154.86 0.58 9.41 -- -- -1.8 -- -- -0.0252 -- 19.8 47520 -- --
267.24 0.763 9.33 -- -- -- -- -- 0.336 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.04 wind 9 43200 > th dose dependent rect. 10 11
4 69.19 wind 9 43200 > th dose dependent sin 17 NA
12 69.35 wind 9 43200 > th dose dependent rect. 10 8
15 69.37 wind 9 43200 > th dose dependent rect. 12 20
17 69.45 wind 9 43200 < th dose independent rect. 8 13
32 69.56 wind 9 43200 > th dose independent rect. 8 13
67 69.64 wind 9 43200 < th dose independent rect. 17 23
74 69.65 wind 9 43200 < th dose independent rect. 20 22
103 69.69 wind 9 43200 > th dose independent rect. 20 22
123 69.73 wind 9 43200 > th dose independent rect. 17 23
151 69.77 wind 9 43200 < th dose independent rect. 12 23
167 69.80 wind 9 43200 < th dose independent sin 22 NA
179 69.82 wind 9 43200 < th dose independent no NA NA
189 69.84 wind 9 43200 < th dose independent rect. 8 10
197 69.86 wind 9 43200 < th dose independent rect. 12 21
208 69.87 wind 9 43200 < th dose independent rect. 15 23
214 69.90 wind 9 43200 > th dose independent no NA NA
218 69.90 wind 9 43200 > th dose independent rect. 12 23
221 69.92 wind 9 43200 < th dose independent rect. 20 20
228 69.95 wind 9 43200 > th dose independent sin 22 NA
229 69.95 wind 9 43200 > th dose independent rect. 8 10
232 69.96 wind 9 43200 > th dose independent rect. 12 21
243 69.98 wind 9 43200 > th dose independent rect. 15 23
258 70.05 wind 9 43200 < th dose independent rect. 9 5
260 70.05 wind 9 43200 > th dose independent rect. 20 20
262 70.06 humidity 80 43200 < th dose independent rect. 4 3
265 70.07 wind 9 43200 < th dose independent rect. 8 8
266 70.07 wind 7 43200 > th dose dependent rect. 8 14
273 70.08 wind 7 43200 > th dose dependent rect. 8 17
319 70.14 wind 7 43200 > th dose dependent sin 23 NA
341 70.17 wind 7 43200 > th dose dependent rect. 8 10
363 70.19 wind 7 43200 > th dose dependent rect. 20 22
374 70.21 wind 7 43200 > th dose dependent rect. 8 8
384 70.23 wind 9 43200 < th dose independent sin 15 NA
413 70.26 wind 3 43200 > th dose dependent rect. 24 18
420 70.27 wind 9 43200 > th dose independent rect. 9 6
437 70.29 wind 7 43200 > th dose dependent no NA NA
440 70.29 wind 7 43200 > th dose dependent rect. 15 23
450 70.31 wind 9 43200 > th dose independent sin 15 NA
468 70.33 wind 7 43200 > th dose dependent rect. 17 23
512 70.38 wind 9 43200 < th dose dependent rect. 23 17
560 70.46 humidity 80 43200 < th dose independent rect. 21 10
577 70.48 wind 1 43200 > th dose dependent sin 3 NA
619 70.53 wind 3 43200 > th dose independent rect. 1 14
647 70.55 wind 9 43200 < th dose dependent sin 3 NA
651 70.56 wind 3 43200 > th dose independent rect. 23 16
678 70.59 wind 7 43200 > th dose dependent rect. 10 4
689 70.60 wind 3 43200 > th dose dependent rect. 15 20
714 70.63 wind 9 43200 > th dose dependent rect. 15 9
734 70.65 humidity 80 43200 > th dose independent rect. 21 10
736 70.65 wind 9 43200 < th dose dependent rect. 4 11
774 70.68 wind 3 43200 > th dose independent sin 4 NA
785 70.69 wind 3 43200 < th dose independent rect. 1 14
826 70.72 wind 1 43200 > th dose dependent sin 11 NA
885 70.76 wind 9 43200 < th dose dependent sin 11 NA
889 70.76 wind 3 43200 > th dose dependent rect. 16 16
905 70.77 wind 9 43200 < th dose dependent rect. 16 20
928 70.79 wind 3 43200 > th dose dependent no NA NA
937 70.80 wind 3 43200 < th dose independent sin 4 NA
938 70.80 humidity 80 43200 < th dose independent rect. 21 6