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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0450200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.05 (0.0193) R2 : 0.00107
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0284 (0.0406) R2dN8 : 0.00138 R2N8 : 0.00107
σ : 0.364
deviance : 60.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.31 0.356 3.06 0.00421 0.0166 -0.311 -0.258 1.21 0.0238 1.73 1.072 16 -- --
58.26 0.358 3.05 0.0561 0.035 -0.203 -0.384 -- 0.0373 2.68 1.072 16 -- --
57.23 0.355 3.05 0.0108 0.0555 -0.275 -- 1.12 0.0269 6.24 1.072 16 -- --
58.63 0.359 3.04 0.0674 0.0673 -0.184 -- -- 0.0387 5.98 1.001 16 -- --
57.38 0.355 3.06 0.00862 -- -0.297 -- 1.15 0.028 -- 1.072 16 -- --
59.46 0.362 3.05 0.0832 0.113 -- -0.322 -- 0.0338 4.02 -- -- -- --
59.69 0.362 3.04 0.0874 0.119 -- -- -- 0.0356 5.17 -- -- -- --
58.84 0.359 3.04 0.0662 -- -0.21 -- -- 0.0405 -- 1.037 16 -- --
58.75 0.359 3.04 -- 0.0666 -0.19 -- -- 0.0314 5.98 1.042 16 -- --
60.43 0.363 3.04 0.0917 -- -- -- -- 0.0386 -- -- -- -- --
59.89 0.362 3.05 -- 0.121 -- -- -- 0.0258 5.14 -- -- -- --
58.95 0.359 3.05 -- -- -0.216 -- -- 0.0333 -- 1 16 -- --
60.65 0.364 3.05 -- -- -- -- -- 0.0284 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.96 temperature 25.0 90 > th dose independent rect. 1 2
4 51.01 atmosphere 995.0 30 > th dose independent rect. 3 23
5 51.01 temperature 25.0 90 > th dose dependent rect. 2 1
6 51.01 atmosphere 1005.0 30 > th dose dependent rect. 2 1
7 51.03 wind 3.0 30 < th dose independent rect. 2 1
8 51.03 wind 3.0 30 < th dose dependent rect. 2 1
13 51.04 radiation 1.0 14400 < th dose dependent rect. 3 1
16 51.05 atmosphere 1005.0 30 > th dose independent rect. 2 1
25 51.07 humidity 90.0 30 > th dose independent rect. 2 1
26 51.07 humidity 50.0 30 > th dose dependent rect. 2 1
30 51.08 temperature 10.0 30 > th dose independent rect. 2 1
32 51.08 temperature 30.0 30 < th dose independent rect. 2 1
33 51.08 humidity 50.0 30 > th dose independent rect. 2 1
37 51.08 atmosphere 995.0 30 > th dose independent rect. 2 1
39 51.08 atmosphere 1010.0 30 < th dose independent rect. 2 1
41 51.08 radiation 1.0 30 < th dose independent rect. 2 1
46 51.08 precipitation 0.1 30 < th dose independent rect. 2 1
47 51.08 temperature 10.0 30 > th dose independent rect. 3 23
50 51.08 radiation 1.0 30 < th dose dependent rect. 2 1
55 51.08 precipitation 0.1 30 < th dose dependent rect. 2 1
58 51.12 atmosphere 1015.0 30 < th dose dependent rect. 2 1
67 51.14 wind 9.0 1440 < th dose independent rect. 3 1
68 51.14 temperature 10.0 1440 > th dose independent rect. 3 1
71 51.14 temperature 30.0 1440 < th dose independent rect. 3 1
75 51.14 humidity 50.0 1440 > th dose independent rect. 3 1
84 51.14 atmosphere 995.0 1440 > th dose independent rect. 3 1
85 51.14 radiation 1.0 1440 < th dose independent rect. 3 1
105 51.14 temperature 10.0 1440 > th dose independent rect. 4 23
118 51.15 precipitation 0.1 30 < th dose independent rect. 3 23
119 51.15 precipitation 0.1 30 < th dose dependent rect. 3 23
121 51.16 temperature 30.0 30 < th dose dependent rect. 2 1
122 51.17 wind 9.0 30 < th dose independent rect. 3 23
127 51.23 wind 1.0 30 > th dose independent rect. 2 1
197 53.26 humidity 50.0 30 > th dose independent rect. 3 23
260 54.74 temperature 30.0 30 < th dose independent rect. 3 23
261 54.77 wind 1.0 30 < th dose independent rect. 24 3
271 54.86 atmosphere 1015.0 30 < th dose independent rect. 3 23
275 54.92 wind 9.0 30 < th dose dependent rect. 3 23
282 55.01 temperature 25.0 270 > th dose dependent rect. 23 7
291 55.16 humidity 90.0 90 < th dose independent rect. 2 1
297 55.34 temperature 10.0 30 > th dose dependent rect. 3 23
313 55.52 wind 1.0 10 < th dose independent rect. 14 13
351 55.76 temperature 25.0 1440 < th dose independent rect. 1 1
356 55.84 radiation 20.0 10 < th dose dependent rect. 3 23
392 56.19 wind 1.0 10 < th dose independent rect. 7 20
397 56.21 radiation 10.0 10 < th dose independent rect. 3 23
412 56.30 humidity 80.0 4320 < th dose dependent rect. 1 1
442 56.49 wind 9.0 720 < th dose independent rect. 3 8
443 56.49 wind 3.0 10 < th dose dependent rect. 22 5
448 56.52 atmosphere 1015.0 1440 < th dose independent rect. 3 1
452 56.54 wind 1.0 10 > th dose independent sin 16 NA
456 56.56 atmosphere 1015.0 720 < th dose independent rect. 3 8
508 56.70 radiation 40.0 30 < th dose independent rect. 11 16
514 56.71 humidity 50.0 720 > th dose independent rect. 3 8
562 56.82 wind 1.0 30 > th dose independent rect. 3 23
568 56.84 temperature 15.0 720 > th dose independent rect. 3 8
572 56.85 humidity 90.0 90 < th dose independent rect. 1 4
574 56.85 atmosphere 995.0 720 > th dose independent rect. 3 8
575 56.85 temperature 10.0 720 > th dose independent rect. 11 16
583 56.87 humidity 90.0 10 > th dose independent rect. 24 3
585 56.87 wind 1.0 10 > th dose independent rect. 12 23
590 56.89 temperature 10.0 720 > th dose independent rect. 15 8
591 56.89 temperature 10.0 720 > th dose independent rect. 23 16
597 56.91 wind 7.0 90 < th dose independent rect. 3 16
604 56.94 temperature 15.0 720 > th dose independent rect. 7 8
621 56.98 temperature 25.0 270 < th dose independent rect. 22 9
622 56.98 precipitation 0.1 720 < th dose independent rect. 23 16
629 56.98 radiation 40.0 30 < th dose dependent rect. 11 16
630 56.98 precipitation 0.1 720 < th dose dependent rect. 23 16
631 56.99 humidity 80.0 4320 < th dose independent rect. 1 1
633 56.99 precipitation 0.1 720 < th dose independent rect. 7 8
635 56.99 precipitation 0.1 720 < th dose dependent rect. 7 8
647 57.03 wind 1.0 30 > th dose dependent rect. 2 1
655 57.05 wind 9.0 720 < th dose independent rect. 23 16
657 57.06 wind 1.0 10 > th dose dependent rect. 11 1
659 57.07 precipitation 0.1 720 < th dose independent rect. 3 16
664 57.07 precipitation 0.1 720 < th dose dependent rect. 3 16
671 57.09 wind 1.0 10 > th dose independent rect. 21 23
674 57.10 atmosphere 1000.0 30 > th dose independent rect. 3 8
675 57.10 temperature 15.0 720 > th dose independent rect. 3 16
676 57.10 atmosphere 1015.0 720 < th dose independent rect. 3 16
686 57.12 precipitation 0.1 720 < th dose independent rect. 3 8
689 57.12 precipitation 0.1 720 < th dose dependent rect. 3 8
696 57.13 wind 9.0 720 < th dose dependent rect. 2 1
700 57.14 wind 5.0 10 > th dose dependent rect. 10 2
703 57.15 humidity 80.0 4320 > th dose independent rect. 1 1
704 57.15 wind 9.0 720 < th dose independent rect. 19 8
723 57.18 radiation 40.0 720 < th dose independent rect. 15 8
737 57.21 temperature 15.0 720 > th dose independent rect. 15 16
738 57.21 atmosphere 995.0 720 > th dose independent rect. 23 16
739 57.21 precipitation 0.1 720 < th dose independent rect. 3 23
742 57.21 precipitation 0.1 720 < th dose dependent rect. 3 23
756 57.24 atmosphere 1015.0 720 < th dose independent rect. 7 8
763 57.25 radiation 30.0 30 < th dose independent rect. 3 8
767 57.26 wind 9.0 720 < th dose independent rect. 7 8
769 57.26 wind 7.0 270 < th dose independent rect. 3 14
776 57.27 wind 1.0 10 < th dose independent rect. 2 7
778 57.27 wind 9.0 10 < th dose independent rect. 14 12
779 57.27 atmosphere 995.0 10 > th dose independent rect. 14 12
787 57.28 temperature 10.0 720 > th dose independent rect. 19 8
788 57.28 temperature 30.0 720 < th dose independent rect. 19 8
789 57.28 humidity 50.0 720 > th dose independent rect. 19 8
790 57.28 atmosphere 995.0 720 > th dose independent rect. 19 8
791 57.28 radiation 1.0 720 < th dose independent rect. 19 8
798 57.28 atmosphere 1015.0 30 < th dose independent rect. 11 16
802 57.28 radiation 1.0 720 < th dose dependent rect. 19 8
817 57.29 humidity 50.0 720 > th dose independent rect. 21 18
821 57.30 precipitation 0.1 10 < th dose independent rect. 2 12
824 57.30 atmosphere 995.0 30 > th dose dependent rect. 3 8
825 57.30 precipitation 0.1 10 < th dose dependent rect. 2 12
827 57.31 radiation 40.0 30 < th dose independent rect. 11 1
831 57.31 temperature 10.0 90 > th dose dependent rect. 3 16
834 57.32 wind 7.0 10 > th dose independent rect. 10 3
838 57.32 precipitation 0.1 30 < th dose independent rect. 11 16
840 57.32 precipitation 0.1 30 < th dose dependent rect. 11 16
843 57.33 humidity 90.0 270 < th dose independent rect. 23 6
845 57.33 radiation 40.0 30 < th dose independent rect. 14 12
853 57.34 precipitation 0.1 720 < th dose independent rect. 21 18
866 57.34 precipitation 0.1 720 < th dose dependent rect. 21 18
872 57.35 atmosphere 995.0 720 > th dose independent rect. 7 8
879 57.35 humidity 50.0 30 > th dose dependent rect. 3 23
882 57.36 humidity 50.0 720 > th dose independent rect. 14 1
887 57.36 wind 9.0 30 < th dose independent rect. 3 8
893 57.36 wind 9.0 30 < th dose dependent rect. 3 8
899 57.37 humidity 60.0 720 > th dose independent rect. 3 6
900 57.37 temperature 10.0 30 > th dose independent rect. 3 8
902 57.37 humidity 50.0 30 > th dose independent rect. 3 8
904 57.37 atmosphere 1015.0 30 < th dose independent rect. 3 8
905 57.37 temperature 10.0 30 > th dose independent rect. 11 16
914 57.38 temperature 10.0 10 > th dose independent rect. 2 12
916 57.38 temperature 10.0 10 > th dose independent rect. 14 12
918 57.38 atmosphere 995.0 10 > th dose independent rect. 2 12
919 57.38 atmosphere 1015.0 10 < th dose independent rect. 2 12
930 57.39 wind 9.0 720 < th dose independent rect. 15 6
944 57.40 atmosphere 995.0 720 > th dose independent rect. 14 1
952 57.40 precipitation 0.1 10 < th dose independent rect. 14 12
953 57.40 atmosphere 995.0 720 > th dose independent rect. 21 18
957 57.40 precipitation 0.1 10 < th dose dependent rect. 14 12
960 57.41 temperature 15.0 720 > th dose independent rect. 14 1
982 57.41 wind 7.0 90 > th dose dependent rect. 10 1
991 57.42 wind 7.0 90 > th dose independent rect. 10 1
996 57.42 atmosphere 1010.0 90 < th dose independent rect. 3 16
997 57.42 radiation 40.0 10 < th dose dependent rect. 12 1