Os12g0443600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH).
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Os12g0443600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.05 | 0.312 | 10.9 | 0.395 | 1.05 | 0.6 | 0.049 | 0.425 | 0.369 | 4.68 | 90.27 | 245 | -- | -- |
| 44.14 | 0.309 | 10.9 | 0.412 | 1.07 | 0.63 | 0.244 | -- | 0.37 | 4.71 | 91 | 233 | -- | -- |
| 43.97 | 0.309 | 10.9 | 0.394 | 1.06 | 0.621 | -- | 0.46 | 0.366 | 4.67 | 90.98 | 237 | -- | -- |
| 44.29 | 0.31 | 10.9 | 0.411 | 1.06 | 0.648 | -- | -- | 0.374 | 4.69 | 91 | 230 | -- | -- |
| 74.89 | 0.403 | 10.9 | 0.338 | -- | 1.14 | -- | 0.338 | 0.467 | -- | 78.58 | 234 | -- | -- |
| 50.57 | 0.333 | 10.9 | 0.474 | 1.32 | -- | 0.592 | -- | 0.279 | 4.76 | -- | -- | -- | -- |
| 51.47 | 0.336 | 10.9 | 0.471 | 1.33 | -- | -- | -- | 0.276 | 4.72 | -- | -- | -- | -- |
| 72.01 | 0.395 | 10.9 | 0.469 | -- | 1.25 | -- | -- | 0.376 | -- | 64.74 | 253 | -- | -- |
| 48.69 | 0.325 | 10.9 | -- | 1.05 | 0.69 | -- | -- | 0.337 | 4.66 | 90.84 | 233 | -- | -- |
| 144.71 | 0.562 | 11 | 0.521 | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
| 57.31 | 0.354 | 11 | -- | 1.33 | -- | -- | -- | 0.224 | 4.71 | -- | -- | -- | -- |
| 77.57 | 0.41 | 10.9 | -- | -- | 1.22 | -- | -- | 0.338 | -- | 66.97 | 246 | -- | -- |
| 151.87 | 0.575 | 11 | -- | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 10 | 39.33 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 16 | 39.54 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 18 | 39.61 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 29 | 40.03 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 33 | 40.10 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 51 | 40.40 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 63 | 40.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 65 | 40.55 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 11 |
| 73 | 40.62 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 81 | 40.73 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 86 | 40.76 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 14 |
| 89 | 40.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 91 | 40.79 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 114 | 40.95 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 124 | 40.99 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 127 | 40.99 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 133 | 41.02 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 139 | 41.04 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 14 |
| 143 | 41.06 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 153 | 41.08 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 158 | 41.10 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 18 |
| 173 | 41.16 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 177 | 41.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 189 | 41.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 11 |
| 190 | 41.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 191 | 41.21 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 14 |
| 197 | 41.23 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 205 | 41.26 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 207 | 41.27 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 212 | 41.28 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 12 |
| 221 | 41.30 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 223 | 41.30 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 225 | 41.31 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 227 | 41.32 | radiation | 40.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 237 | 41.36 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 11 |
| 244 | 41.37 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 250 | 41.39 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 5 |
| 252 | 41.39 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 262 | 41.41 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 263 | 41.41 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 269 | 41.42 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 275 | 41.44 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 276 | 41.44 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 277 | 41.44 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 278 | 41.45 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 279 | 41.45 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 286 | 41.47 | temperature | 15.0 | 90 | > th | dose independent | rect. | 14 | 17 |
| 303 | 41.51 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 312 | 41.52 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 3 |
| 314 | 41.52 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 316 | 41.54 | wind | 7.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 318 | 41.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 321 | 41.54 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 323 | 41.54 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 325 | 41.54 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 330 | 41.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 338 | 41.55 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 346 | 41.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 20 |
| 351 | 41.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 367 | 41.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 372 | 41.60 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 19 |
| 377 | 41.61 | radiation | 20.0 | 30 | < th | dose independent | rect. | 4 | 8 |
| 384 | 41.62 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 393 | 41.65 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 9 |
| 403 | 41.67 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 423 | 41.70 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 19 |
| 433 | 41.72 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 19 |
| 440 | 41.74 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 452 | 41.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 466 | 41.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 475 | 41.77 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 507 | 41.81 | temperature | 25.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 511 | 41.81 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 11 |
| 513 | 41.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 515 | 41.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 523 | 41.83 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 526 | 41.84 | radiation | 20.0 | 30 | < th | dose independent | rect. | 4 | 13 |
| 529 | 41.85 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 14 |
| 531 | 41.85 | humidity | 60.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 533 | 41.86 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 537 | 41.87 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 17 |
| 549 | 41.88 | wind | 9.0 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 560 | 41.90 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 580 | 41.93 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 584 | 41.93 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 593 | 41.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 594 | 41.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 597 | 41.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 600 | 41.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 602 | 41.95 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 617 | 41.96 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 635 | 41.98 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 640 | 41.98 | wind | 9.0 | 720 | < th | dose dependent | rect. | 6 | 4 |
| 695 | 42.04 | temperature | 25.0 | 270 | < th | dose independent | sin | 7 | NA |
| 696 | 42.04 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 697 | 42.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 11 |
| 698 | 42.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 699 | 42.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 13 |
| 708 | 42.05 | temperature | 30.0 | 90 | < th | dose independent | rect. | 14 | 17 |
| 719 | 42.06 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 724 | 42.07 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 738 | 42.08 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 23 | 14 |
| 750 | 42.09 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 770 | 42.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 13 |
| 778 | 42.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 793 | 42.13 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 836 | 42.17 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 846 | 42.18 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 13 |
| 848 | 42.18 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 852 | 42.18 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 14 |
| 858 | 42.19 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 875 | 42.21 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 898 | 42.23 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 955 | 42.28 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 18 |
| 987 | 42.30 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 13 |