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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0443000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.56 (0.0437) R2 : 0.122
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.42 (0.183) R2dE : 0.128 R2E : 0.121
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0593 (0.0957) R2dN8 : 0.00104 R2N8 : -0.00556
σ : 0.812
deviance : 303.84
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 22.49
memory length : 2474
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
284.65 0.793 5.59 -0.554 0.47 1.2 -0.916 0.0799 -0.0646 14.8 23.1 722 -- --
284.56 0.786 5.59 -0.546 0.485 1.19 -0.912 -- -0.069 14.8 23 651 -- --
287.28 0.789 5.58 -0.539 0.468 1.17 -- -0.14 -0.0655 14.4 23 714 -- --
287.31 0.789 5.59 -0.565 0.466 1.19 -- -- -0.0698 14.3 23 712 -- --
298.75 0.805 5.59 -0.533 -- 1.35 -- 0.0271 -0.0528 -- 23.1 878 -- --
302.4 0.815 5.63 -0.85 0.54 -- -0.829 -- -0.254 14 -- -- -- --
304.87 0.818 5.63 -0.876 0.537 -- -- -- -0.26 13.5 -- -- -- --
298.75 0.805 5.59 -0.532 -- 1.34 -- -- -0.0516 -- 23.1 878 -- --
291.3 0.795 5.56 -- 0.462 1.33 -- -- 0.0465 14 22.27 2513 -- --
322.54 0.839 5.64 -0.897 -- -- -- -- -0.271 -- -- -- -- --
325.08 0.843 5.61 -- 0.553 -- -- -- -0.162 13.6 -- -- -- --
303.84 0.812 5.56 -- -- 1.42 -- -- 0.0593 -- 22.49 2474 -- --
343.78 0.865 5.61 -- -- -- -- -- -0.172 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 276.42 humidity 90.0 14400 > th dose dependent rect. 7 1
4 277.68 temperature 10.0 720 > th dose dependent rect. 21 8
6 278.20 temperature 20.0 1440 > th dose independent rect. 3 1
9 278.52 temperature 20.0 720 > th dose independent rect. 22 7
10 278.54 temperature 20.0 1440 < th dose independent rect. 3 1
13 278.75 humidity 90.0 14400 > th dose independent rect. 7 1
23 279.26 temperature 20.0 720 > th dose independent rect. 21 10
27 279.37 humidity 90.0 14400 > th dose independent rect. 7 3
28 279.39 humidity 80.0 14400 < th dose independent rect. 8 3
45 279.90 temperature 10.0 720 > th dose dependent rect. 21 12
52 280.15 humidity 90.0 14400 > th dose dependent rect. 20 1
62 280.24 humidity 70.0 14400 > th dose dependent rect. 8 3
76 280.52 humidity 90.0 14400 < th dose independent rect. 7 1
78 280.56 atmosphere 995.0 43200 > th dose independent rect. 22 14
80 280.57 atmosphere 995.0 43200 < th dose independent rect. 21 15
87 280.62 humidity 90.0 14400 > th dose dependent rect. 18 5
96 280.70 humidity 90.0 14400 > th dose dependent rect. 20 3
100 280.72 humidity 90.0 14400 > th dose independent rect. 9 1
116 280.84 atmosphere 995.0 43200 < th dose independent rect. 23 12
118 280.85 atmosphere 995.0 43200 > th dose independent rect. 24 11
136 280.97 atmosphere 995.0 43200 > th dose independent rect. 5 3
139 280.98 temperature 30.0 720 < th dose dependent rect. 23 8
143 281.02 atmosphere 995.0 43200 > th dose independent rect. 3 6
144 281.03 atmosphere 995.0 43200 < th dose independent sin 7 NA
149 281.11 atmosphere 995.0 43200 < th dose dependent sin 10 NA
150 281.11 temperature 10.0 720 > th dose dependent rect. 19 14
170 281.23 atmosphere 995.0 43200 < th dose independent rect. 1 9
173 281.24 atmosphere 995.0 43200 < th dose dependent rect. 24 9
179 281.27 atmosphere 995.0 43200 < th dose independent rect. 3 6
196 281.40 atmosphere 995.0 43200 > th dose independent sin 7 NA
241 281.61 humidity 90.0 14400 > th dose dependent rect. 7 9
279 281.80 temperature 20.0 720 > th dose independent sin 10 NA
289 281.85 atmosphere 995.0 43200 < th dose dependent rect. 4 4
295 281.87 humidity 90.0 14400 > th dose dependent rect. 6 17
306 281.94 humidity 90.0 14400 > th dose dependent rect. 7 14
310 281.97 temperature 10.0 720 > th dose dependent sin 10 NA
324 282.03 wind 9.0 14400 < th dose independent rect. 6 5
351 282.09 atmosphere 995.0 43200 < th dose independent rect. 4 4
395 282.30 humidity 90.0 14400 > th dose dependent rect. 3 20
410 282.38 temperature 25.0 720 < th dose dependent sin 10 NA
424 282.45 humidity 90.0 14400 > th dose independent rect. 20 1
502 282.72 humidity 90.0 14400 > th dose dependent sin 18 NA
526 282.79 temperature 25.0 720 < th dose dependent rect. 17 15
540 282.84 temperature 25.0 720 < th dose dependent rect. 17 17
582 282.93 wind 3.0 14400 < th dose dependent rect. 1 1
591 282.95 humidity 90.0 14400 > th dose dependent sin 23 NA
611 283.00 temperature 10.0 90 > th dose dependent rect. 17 23
628 283.05 humidity 80.0 14400 > th dose dependent rect. 12 2
665 283.12 wind 3.0 1440 > th dose dependent rect. 23 2
700 283.25 wind 9.0 14400 > th dose independent rect. 10 1
704 283.26 wind 9.0 14400 < th dose independent rect. 10 1
738 283.33 precipitation 0.1 14400 > th dose independent rect. 14 2
741 283.33 precipitation 0.1 14400 > th dose dependent rect. 14 2
753 283.38 wind 3.0 1440 > th dose independent rect. 22 5
763 283.40 atmosphere 995.0 43200 < th dose dependent rect. 11 19
794 283.49 wind 9.0 14400 > th dose independent rect. 6 5
795 283.49 wind 5.0 1440 < th dose independent rect. 20 5
804 283.52 wind 3.0 4320 > th dose dependent rect. 19 2
811 283.54 precipitation 0.1 14400 < th dose independent rect. 14 2
814 283.54 atmosphere 1015.0 4320 > th dose dependent rect. 3 1
815 283.54 precipitation 0.1 14400 < th dose dependent rect. 14 2
829 283.57 wind 3.0 43200 < th dose dependent rect. 5 1
845 283.61 wind 3.0 1440 > th dose independent rect. 1 1
878 283.68 atmosphere 995.0 43200 < th dose dependent rect. 13 20
881 283.71 temperature 20.0 4320 < th dose independent rect. 6 1
902 283.75 wind 3.0 1440 < th dose independent rect. 1 1
928 283.82 humidity 90.0 14400 > th dose independent rect. 7 15
948 283.88 radiation 10.0 1440 < th dose dependent rect. 11 1
950 283.89 temperature 20.0 4320 < th dose dependent rect. 4 1
985 283.97 temperature 20.0 720 < th dose independent sin 10 NA
994 283.98 temperature 15.0 10 > th dose dependent rect. 6 23
995 283.99 humidity 80.0 14400 > th dose independent rect. 13 1
996 283.99 wind 5.0 1440 > th dose independent rect. 20 5