Os12g0441200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0441200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 311.63 | 0.829 | 7.09 | 2.35 | 0.698 | 2.9 | -0.346 | 1.7 | -0.149 | 9.33 | 19.76 | 3969 | -- | -- |
| 315.16 | 0.827 | 7.02 | 2.7 | 0.818 | 2.63 | -0.188 | -- | -0.0644 | 9.48 | 19.71 | 4488 | -- | -- |
| 311.16 | 0.822 | 7.09 | 2.41 | 0.74 | 2.94 | -- | 1.8 | -0.141 | 9.71 | 19.6 | 4671 | -- | -- |
| 315.31 | 0.827 | 7.02 | 2.65 | 0.768 | 2.54 | -- | -- | -0.0798 | 9.64 | 19.7 | 4518 | -- | -- |
| 338.24 | 0.857 | 7.11 | 2.56 | -- | 3.31 | -- | 1.98 | -0.142 | -- | 18.9 | 5049 | -- | -- |
| 419.4 | 0.96 | 7.17 | 1.09 | 0.753 | -- | -0.265 | -- | -0.733 | 9.88 | -- | -- | -- | -- |
| 419.67 | 0.959 | 7.17 | 1.08 | 0.755 | -- | -- | -- | -0.734 | 9.84 | -- | -- | -- | -- |
| 341.61 | 0.861 | 7.04 | 2.54 | -- | 2.6 | -- | -- | -0.0907 | -- | 19.76 | 3683 | -- | -- |
| 375.25 | 0.902 | 7.1 | -- | 0.745 | 1.4 | -- | -- | -0.431 | 8.96 | 22.32 | 1478 | -- | -- |
| 453.76 | 0.995 | 7.19 | 1.07 | -- | -- | -- | -- | -0.733 | -- | -- | -- | -- | -- |
| 450.58 | 0.993 | 7.2 | -- | 0.752 | -- | -- | -- | -0.854 | 9.74 | -- | -- | -- | -- |
| 394.35 | 0.925 | 7.12 | -- | -- | 1.32 | -- | -- | -0.446 | -- | 22.34 | 783 | -- | -- |
| 484.23 | 1.03 | 7.22 | -- | -- | -- | -- | -- | -0.853 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 295.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 2 | 297.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 4 | 297.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 10 | 300.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 11 | 300.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 14 | 301.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 52 | 304.03 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 80 | 305.42 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 84 | 305.48 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 97 | 305.91 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 110 | 306.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 113 | 306.39 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 133 | 306.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 149 | 306.84 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 332 | 309.01 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 476 | 310.54 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 901 | 313.78 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 945 | 314.03 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 4 |