Os12g0435100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0435100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.85 | 0.351 | 2.87 | 0.0398 | 0.165 | 1.04 | -0.0933 | 2.34 | 0.0893 | 9.89 | 9.279 | 293 | -- | -- |
| 55.99 | 0.349 | 2.86 | 0.018 | 0.165 | 0.523 | -0.0596 | -- | 0.0913 | 10.3 | 9.488 | 370 | -- | -- |
| 55.87 | 0.348 | 2.87 | 0.0366 | 0.165 | 0.975 | -- | 2.04 | 0.0852 | 9.92 | 9.482 | 292 | -- | -- |
| 56 | 0.349 | 2.86 | 0.0136 | 0.164 | 0.516 | -- | -- | 0.0903 | 9.97 | 9.501 | 370 | -- | -- |
| 57.51 | 0.353 | 2.87 | 0.0285 | -- | 0.94 | -- | 1.83 | 0.0891 | -- | 9.477 | 258 | -- | -- |
| 56.72 | 0.353 | 2.86 | -0.0135 | 0.159 | -- | -0.0478 | -- | 0.0798 | 10.3 | -- | -- | -- | -- |
| 56.73 | 0.353 | 2.86 | -0.0154 | 0.16 | -- | -- | -- | 0.0797 | 10.4 | -- | -- | -- | -- |
| 57.45 | 0.353 | 2.86 | -0.00157 | -- | 0.545 | -- | -- | 0.0973 | -- | 10.2 | 258 | -- | -- |
| 55.91 | 0.348 | 2.87 | -- | 0.161 | 0.545 | -- | -- | 0.0843 | 10 | 10.2 | 370 | -- | -- |
| 58.28 | 0.357 | 2.87 | -0.0179 | -- | -- | -- | -- | 0.0792 | -- | -- | -- | -- | -- |
| 56.73 | 0.352 | 2.86 | -- | 0.16 | -- | -- | -- | 0.0815 | 10.4 | -- | -- | -- | -- |
| 57.44 | 0.353 | 2.87 | -- | -- | 0.593 | -- | -- | 0.0885 | -- | 10.2 | 240 | -- | -- |
| 58.29 | 0.356 | 2.87 | -- | -- | -- | -- | -- | 0.0812 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.25 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 2 | 53.40 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 4 | 53.59 | humidity | 70.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 7 | 53.72 | wind | 1.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 8 | 53.74 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 10 | 53.82 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 12 | 53.84 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 19 | 54.00 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 28 | 54.06 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 30 | 54.07 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 40 | 54.12 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 47 | 54.13 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 50 | 54.16 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 65 | 54.17 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 3 |
| 135 | 54.35 | humidity | 60.0 | 10 | < th | dose independent | rect. | 17 | 17 |
| 137 | 54.35 | wind | 1.0 | 720 | < th | dose dependent | rect. | 9 | 17 |
| 138 | 54.36 | humidity | 60.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 175 | 54.36 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 206 | 54.37 | humidity | 60.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 216 | 54.37 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 295 | 54.37 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 348 | 54.38 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 383 | 54.40 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 450 | 54.44 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 501 | 54.51 | humidity | 80.0 | 270 | < th | dose independent | rect. | 5 | 4 |
| 516 | 54.52 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 522 | 54.52 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 560 | 54.55 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 585 | 54.61 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 621 | 54.65 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 642 | 54.68 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 644 | 54.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 647 | 54.68 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 651 | 54.68 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 660 | 54.68 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 661 | 54.68 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 662 | 54.68 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 680 | 54.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 685 | 54.69 | wind | 1.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 703 | 54.70 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 706 | 54.70 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 707 | 54.70 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 708 | 54.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 709 | 54.70 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 710 | 54.70 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 711 | 54.70 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 713 | 54.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 737 | 54.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 740 | 54.71 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 741 | 54.71 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 744 | 54.71 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 746 | 54.71 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 748 | 54.71 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 755 | 54.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 756 | 54.71 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 757 | 54.71 | wind | 5.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 759 | 54.71 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 760 | 54.71 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 798 | 54.73 | radiation | 40.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 823 | 54.73 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 836 | 54.74 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 841 | 54.76 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 875 | 54.78 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 900 | 54.80 | radiation | 40.0 | 10 | > th | dose dependent | sin | 12 | NA |