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Os12g0434400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase) (Proline aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 452.14 | 0.999 | 3.74 | 3 | 0.693 | -3.68 | 0.341 | -1.95 | 1.27 | 1.61 | 14.93 | 2991 | -- | -- |
| 454.72 | 0.993 | 3.65 | 3.37 | 0.699 | -3.42 | 0.221 | -- | 1.37 | 1.71 | 16.33 | 2842 | -- | -- |
| 452.56 | 0.991 | 3.73 | 3.03 | 0.681 | -3.57 | -- | -1.62 | 1.28 | 1.56 | 15.8 | 2993 | -- | -- |
| 454.26 | 0.993 | 3.68 | 3.35 | 0.801 | -3.36 | -- | -- | 1.38 | 1.6 | 16.97 | 2776 | -- | -- |
| 476.18 | 1.02 | 3.73 | 3.28 | -- | -3.6 | -- | -1.67 | 1.28 | -- | 15.69 | 4660 | -- | -- |
| 720.84 | 1.26 | 3.84 | 1.95 | 0.489 | -- | 0.213 | -- | 0.649 | 1.27 | -- | -- | -- | -- |
| 721.02 | 1.26 | 3.84 | 1.94 | 0.488 | -- | -- | -- | 0.648 | 1.21 | -- | -- | -- | -- |
| 478.14 | 1.02 | 3.67 | 3.64 | -- | -3.45 | -- | -- | 1.39 | -- | 16.9 | 4666 | -- | -- |
| 692.5 | 1.23 | 3.77 | -- | 0.777 | -2.62 | -- | -- | 0.903 | 1.81 | 16.85 | 1244 | -- | -- |
| 735.77 | 1.27 | 3.83 | 1.96 | -- | -- | -- | -- | 0.658 | -- | -- | -- | -- | -- |
| 820.72 | 1.34 | 3.89 | -- | 0.522 | -- | -- | -- | 0.431 | 1.36 | -- | -- | -- | -- |
| 692.31 | 1.23 | 3.8 | -- | -- | -1.99 | -- | -- | 0.81 | -- | 21.88 | 1657 | -- | -- |
| 837.49 | 1.35 | 3.88 | -- | -- | -- | -- | -- | 0.44 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 444.79 | temperature | 15 | 4320 | > th | dose dependent | rect. | 24 | 4 |
| 3 | 444.87 | temperature | 15 | 4320 | > th | dose dependent | rect. | 24 | 6 |
| 7 | 445.03 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 23 | 445.72 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 4 |
| 24 | 445.76 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 8 |
| 82 | 446.48 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 160 | 447.54 | temperature | 15 | 4320 | > th | dose dependent | sin | 10 | NA |
| 195 | 448.02 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 218 | 448.30 | temperature | 15 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 303 | 449.44 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 978 | 457.02 | temperature | 15 | 4320 | > th | dose dependent | no | NA | NA |
