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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0433500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Fused1 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.65 (0.0326) R2 : 0.502
β1 : 2.21 (0.119) R2dD : 0.389 R2D : 0.371
β2 : 0.927 (0.0851) R2dC : 0.13 R2C : 0.121
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0932 (0.0695) R2dN8 : 0.00263 R2N8 : -0.01
σ : 0.612
deviance : 170.99
__
_____
C
peak time of C : 18.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
139.44 0.555 5.58 2.7 0.966 0.457 -0.571 -2.09 0.274 17.8 20 173 -- --
152.95 0.576 5.62 2.63 0.999 0.954 -0.301 -- 0.248 17.5 19.31 165 -- --
138.64 0.548 5.57 2.73 0.964 0.462 -- -2.3 0.282 17.6 19.4 193 -- --
152.25 0.575 5.61 2.56 1.03 0.946 -- -- 0.262 17.6 19.4 165 -- --
186.12 0.635 5.57 2.6 -- 0.13 -- -2.71 0.203 -- 19.3 193 -- --
170.96 0.613 5.65 2.21 0.928 -- -0.108 -- 0.0935 18.1 -- -- -- --
170.99 0.612 5.65 2.21 0.927 -- -- -- 0.0932 18.1 -- -- -- --
197.49 0.655 5.61 2.5 -- 1.21 -- -- 0.17 -- 18.41 212 -- --
299.1 0.81 5.7 -- 0.9 0.135 -- -- -0.137 18.1 19.4 165 -- --
215.57 0.686 5.64 2.18 -- -- -- -- 0.0723 -- -- -- -- --
299.68 0.81 5.71 -- 0.895 -- -- -- -0.153 18.2 -- -- -- --
291.73 0.795 5.72 -- -- -0.901 -- -- -0.298 -- 27.1 365 -- --
341.27 0.862 5.69 -- -- -- -- -- -0.17 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 138.87 temperature 20 30 > th dose independent rect. 11 23
2 139.65 temperature 25 90 < th dose dependent rect. 11 23
3 139.78 temperature 20 90 < th dose independent rect. 16 23
6 139.87 temperature 20 90 > th dose independent rect. 19 23
8 139.96 temperature 20 90 < th dose independent rect. 22 23
9 140.01 temperature 20 270 < th dose independent rect. 9 22
10 140.05 temperature 25 10 < th dose dependent rect. 13 23
17 140.33 temperature 20 90 > th dose independent rect. 15 23
22 140.47 temperature 20 90 > th dose independent rect. 9 23
23 140.47 temperature 20 90 > th dose independent rect. 24 23
27 140.61 temperature 25 10 < th dose dependent rect. 3 23
28 140.65 temperature 25 10 < th dose dependent rect. 23 23
29 140.66 temperature 25 10 < th dose dependent rect. 17 23
30 140.68 temperature 25 10 < th dose dependent rect. 5 23
31 140.72 temperature 20 90 < th dose independent rect. 11 23
34 140.78 temperature 25 10 < th dose dependent no NA NA
35 140.79 temperature 20 90 > th dose independent sin 7 NA
36 140.79 temperature 25 10 < th dose dependent rect. 15 23
37 140.79 temperature 25 10 < th dose dependent rect. 19 23
38 140.80 temperature 20 90 < th dose independent rect. 19 23
39 140.84 temperature 20 90 < th dose independent rect. 13 23
41 140.86 temperature 25 10 < th dose dependent rect. 9 23
42 140.87 temperature 20 90 < th dose independent no NA NA
43 140.91 temperature 25 10 < th dose dependent rect. 11 23
44 140.93 temperature 25 10 < th dose dependent sin 7 NA
47 140.94 temperature 20 90 < th dose independent rect. 22 16
49 140.94 temperature 20 90 > th dose independent rect. 13 23
50 140.94 temperature 25 10 < th dose dependent rect. 21 23
54 141.00 temperature 20 90 > th dose independent no NA NA
56 141.03 temperature 20 90 < th dose independent rect. 3 23
69 141.14 temperature 25 10 < th dose dependent rect. 1 23
71 141.17 temperature 20 90 < th dose independent sin 8 NA
72 141.17 temperature 20 90 < th dose independent rect. 19 20
73 141.17 temperature 25 10 < th dose dependent rect. 7 23
94 141.34 temperature 20 30 > th dose independent rect. 22 14
102 141.44 temperature 20 90 < th dose independent rect. 22 14
116 141.51 temperature 25 90 < th dose dependent rect. 17 18
123 141.55 temperature 25 90 < th dose dependent rect. 15 20
132 141.65 temperature 20 270 < th dose independent sin 10 NA
140 141.72 temperature 20 90 < th dose independent rect. 19 17
146 141.80 temperature 20 270 > th dose independent rect. 21 15
160 141.90 temperature 20 90 < th dose independent rect. 23 12
174 141.93 temperature 20 90 < th dose independent rect. 1 23
183 141.99 temperature 20 270 > th dose independent rect. 22 23
198 142.04 temperature 20 90 > th dose independent rect. 4 23
251 142.33 temperature 20 30 > th dose independent rect. 22 23
316 142.66 temperature 20 30 > th dose independent rect. 22 16
384 142.98 temperature 20 30 > th dose independent rect. 20 18
569 143.92 wind 1 43200 < th dose dependent rect. 2 1
588 144.04 temperature 20 270 < th dose independent rect. 21 11
606 144.19 temperature 20 720 < th dose independent rect. 21 2
623 144.31 temperature 20 720 < th dose independent rect. 20 4
684 144.57 temperature 25 90 < th dose dependent rect. 23 12
719 144.84 wind 1 43200 < th dose independent rect. 2 1
729 144.87 temperature 20 30 > th dose independent rect. 11 21
740 144.94 temperature 25 90 < th dose dependent rect. 21 14
916 145.82 temperature 20 14400 < th dose dependent rect. 21 1
975 146.11 wind 1 43200 > th dose independent rect. 2 1