Os12g0433200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0433200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.59 | 0.485 | 2.64 | 2.11 | 0.2 | -17.2 | -0.222 | 106 | -0.0317 | 11.4 | 994.7 | 1524 | -- | -- |
| 109.39 | 0.491 | 3 | 0.0103 | 0.202 | 0.697 | -0.227 | -- | -0.0303 | 10.8 | 998.6 | 1016 | -- | -- |
| 105.86 | 0.479 | 2.64 | 1.78 | 0.214 | -17.2 | -- | 107 | 0.0792 | 10.9 | 996.8 | 1260 | -- | -- |
| 105.68 | 0.479 | 2.99 | -0.0114 | 0.209 | 1.2 | -- | -- | -0.026 | 11.4 | 997.7 | 1385 | -- | -- |
| 105.86 | 0.479 | 2.71 | 1.7 | -- | -17.2 | -- | 108 | -0.0319 | -- | 997.3 | 1281 | -- | -- |
| 112.46 | 0.497 | 3 | 0.0497 | 0.202 | -- | -0.227 | -- | -0.0457 | 10.9 | -- | -- | -- | -- |
| 112.68 | 0.497 | 3 | 0.0405 | 0.203 | -- | -- | -- | -0.0464 | 10.9 | -- | -- | -- | -- |
| 108.23 | 0.485 | 3 | -0.0123 | -- | 1.19 | -- | -- | -0.0271 | -- | 997.7 | 1404 | -- | -- |
| 105.68 | 0.479 | 2.99 | -- | 0.205 | 1.2 | -- | -- | -0.0276 | 11.2 | 997.7 | 1392 | -- | -- |
| 115.25 | 0.502 | 3 | 0.0362 | -- | -- | -- | -- | -0.0478 | -- | -- | -- | -- | -- |
| 112.72 | 0.497 | 3 | -- | 0.203 | -- | -- | -- | -0.0509 | 10.9 | -- | -- | -- | -- |
| 108.23 | 0.485 | 3 | -- | -- | 1.19 | -- | -- | -0.0258 | -- | 997.7 | 1403 | -- | -- |
| 115.28 | 0.501 | 3 | -- | -- | -- | -- | -- | -0.0518 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.47 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 7 | 3 |
| 3 | 96.05 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 9 | 96.54 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 18 | 96.82 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 77 | 101.27 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 7 | 3 |
| 84 | 101.46 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 2 |
| 109 | 101.75 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 8 | 1 |
| 111 | 101.75 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 22 | 12 |
| 139 | 102.07 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 6 | 1 |
| 224 | 103.31 | atmosphere | 1000 | 720 | < th | dose dependent | sin | 7 | NA |
| 380 | 104.80 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 410 | 104.96 | temperature | 25 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 440 | 105.13 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 24 | 11 |
| 461 | 105.24 | temperature | 25 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 467 | 105.25 | temperature | 25 | 720 | > th | dose dependent | rect. | 2 | 4 |
| 505 | 105.41 | atmosphere | 1000 | 10 | < th | dose dependent | sin | 2 | NA |
| 636 | 105.84 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 2 | 9 |
| 666 | 105.94 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 11 |
| 717 | 106.11 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 768 | 106.21 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 24 | 11 |
| 796 | 106.26 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 24 | 8 |
| 810 | 106.31 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 22 | 12 |
| 847 | 106.37 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 10 | 16 |
| 852 | 106.38 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 876 | 106.42 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 913 | 106.47 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 23 | 11 |
| 973 | 106.55 | atmosphere | 995 | 1440 | > th | dose independent | sin | 1 | NA |
| 981 | 106.56 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 990 | 106.57 | atmosphere | 995 | 1440 | > th | dose independent | sin | 11 | NA |
| 997 | 106.58 | atmosphere | 995 | 1440 | < th | dose independent | rect. | 16 | 1 |