Os12g0425800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0425800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.38 | 0.434 | 9.81 | -0.969 | 1.66 | -1.73 | 1.24 | -0.382 | 0.682 | 1.79 | 19.69 | 3379 | -- | -- |
| 85.54 | 0.431 | 9.82 | -1 | 1.66 | -1.65 | 1.27 | -- | 0.673 | 1.76 | 19.6 | 3299 | -- | -- |
| 91.3 | 0.445 | 9.82 | -0.979 | 1.66 | -1.73 | -- | -0.435 | 0.686 | 1.85 | 19.61 | 3299 | -- | -- |
| 91.53 | 0.446 | 9.82 | -1.03 | 1.66 | -1.62 | -- | -- | 0.685 | 1.8 | 19.6 | 3299 | -- | -- |
| 241.38 | 0.724 | 9.83 | -0.811 | -- | -1.51 | -- | -0.0934 | 0.623 | -- | 21.7 | 2464 | -- | -- |
| 130.38 | 0.535 | 9.74 | -0.111 | 1.68 | -- | 1.24 | -- | 1.06 | 1.73 | -- | -- | -- | -- |
| 136.37 | 0.547 | 9.74 | -0.151 | 1.69 | -- | -- | -- | 1.06 | 1.81 | -- | -- | -- | -- |
| 241.38 | 0.724 | 9.83 | -0.834 | -- | -1.5 | -- | -- | 0.614 | -- | 21.63 | 2468 | -- | -- |
| 99.48 | 0.465 | 9.8 | -- | 1.7 | -0.961 | -- | -- | 0.803 | 1.82 | 22.1 | 1948 | -- | -- |
| 308.63 | 0.821 | 9.72 | -0.0821 | -- | -- | -- | -- | 1.1 | -- | -- | -- | -- | -- |
| 136.97 | 0.547 | 9.74 | -- | 1.68 | -- | -- | -- | 1.07 | 1.8 | -- | -- | -- | -- |
| 225.58 | 0.7 | 9.83 | -- | -- | -1.44 | -- | -- | 0.618 | -- | 24.8 | 1036 | -- | -- |
| 308.81 | 0.82 | 9.72 | -- | -- | -- | -- | -- | 1.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.57 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 2 | 80.69 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 3 | 80.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 5 | 81.24 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 13 | 81.76 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 15 | 81.90 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 17 | 81.95 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 19 | 82.15 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 22 | 82.34 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 26 | 82.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 27 | 82.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 35 | 82.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 49 | 82.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 2 |
| 56 | 82.90 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 59 | 82.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 63 | 82.93 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 76 | 83.02 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 77 | 83.04 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 79 | 83.05 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 80 | 83.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 84 | 83.10 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 90 | 83.12 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 111 | 83.21 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 122 | 83.26 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 138 | 83.31 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 141 | 83.31 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 167 | 83.43 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 205 | 83.62 | wind | 1 | 14400 | < th | dose dependent | sin | 11 | NA |
| 274 | 83.91 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 310 | 84.02 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 17 |
| 312 | 84.05 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 16 | NA |
| 365 | 84.26 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 379 | 84.29 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 385 | 84.30 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 418 | 84.41 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 16 | NA |
| 535 | 84.78 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 556 | 84.85 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 630 | 85.03 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 642 | 85.05 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 649 | 85.06 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 695 | 85.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 771 | 85.34 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 773 | 85.35 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 822 | 85.44 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 889 | 85.57 | humidity | 50 | 43200 | > th | dose independent | sin | 7 | NA |
| 890 | 85.57 | atmosphere | 1015 | 43200 | < th | dose independent | no | NA | NA |
| 906 | 85.61 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 919 | 85.63 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 929 | 85.65 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 21 |