Os12g0422200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os12g0422200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 217.42 | 0.693 | 3.08 | -0.882 | 0.14 | 0.252 | -0.191 | -2.39 | 0.00142 | 14.8 | 89 | 10096 | -- | -- |
| 223.33 | 0.696 | 3.09 | -0.669 | 0.14 | 0.484 | -0.33 | -- | 0.0926 | 14.9 | 56.45 | 10170 | -- | -- |
| 217.54 | 0.687 | 3.08 | -0.885 | 0.139 | 0.253 | -- | -2.38 | 0.000608 | 14.6 | 88.99 | 10103 | -- | -- |
| 223.15 | 0.696 | 3.09 | -0.676 | 0.137 | 0.469 | -- | -- | 0.0948 | 14.8 | 56 | 10145 | -- | -- |
| 218.67 | 0.689 | 3.08 | -0.884 | -- | 0.247 | -- | -2.39 | -0.000661 | -- | 88.54 | 10117 | -- | -- |
| 228.86 | 0.709 | 3.09 | -0.674 | 0.144 | -- | -0.182 | -- | 0.0802 | 14.9 | -- | -- | -- | -- |
| 228.97 | 0.709 | 3.09 | -0.678 | 0.143 | -- | -- | -- | 0.0791 | 14.8 | -- | -- | -- | -- |
| 224.22 | 0.697 | 3.09 | -0.681 | -- | 0.474 | -- | -- | 0.0931 | -- | 55.97 | 10164 | -- | -- |
| 233.88 | 0.712 | 3.07 | -- | 0.161 | 0.572 | -- | -- | 0.168 | 14.8 | 61.09 | 10176 | -- | -- |
| 230.16 | 0.709 | 3.09 | -0.684 | -- | -- | -- | -- | 0.0754 | -- | -- | -- | -- | -- |
| 241.08 | 0.726 | 3.07 | -- | 0.156 | -- | -- | -- | 0.155 | 14.8 | -- | -- | -- | -- |
| 235.3 | 0.714 | 3.07 | -- | -- | 0.569 | -- | -- | 0.167 | -- | 60.47 | 10185 | -- | -- |
| 242.49 | 0.727 | 3.07 | -- | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.67 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 1 |
| 7 | 203.12 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 1 |
| 8 | 203.12 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 1 |
| 9 | 203.16 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 11 | 203.19 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 1 |
| 13 | 203.37 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 14 | 203.38 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 6 |
| 15 | 203.39 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 21 | 203.47 | wind | 7.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 22 | 203.51 | wind | 7.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 32 | 203.68 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 3 |
| 43 | 204.07 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 61 | 206.28 | wind | 5.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 64 | 206.30 | wind | 3.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 70 | 206.85 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 73 | 207.21 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 79 | 207.35 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 81 | 207.37 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 93 | 207.57 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 19 | 2 |
| 110 | 208.56 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 125 | 209.91 | wind | 9.0 | 270 | > th | dose dependent | rect. | 16 | 7 |
| 144 | 210.44 | wind | 9.0 | 270 | > th | dose independent | rect. | 16 | 18 |
| 167 | 210.70 | temperature | 25.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 178 | 211.20 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 181 | 211.35 | wind | 9.0 | 270 | > th | dose independent | rect. | 16 | 7 |
| 184 | 211.35 | wind | 9.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 224 | 212.18 | wind | 9.0 | 270 | < th | dose independent | sin | 13 | NA |
| 226 | 212.18 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 20 | NA |
| 227 | 212.19 | wind | 9.0 | 270 | > th | dose independent | sin | 12 | NA |
| 326 | 213.08 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 7 | 11 |
| 338 | 213.23 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 11 |
| 459 | 214.21 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 478 | 214.43 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 495 | 214.52 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 555 | 215.10 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 603 | 215.56 | temperature | 20.0 | 10 | > th | dose independent | sin | 21 | NA |
| 616 | 215.69 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 624 | 215.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 627 | 215.73 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 631 | 215.73 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 637 | 215.73 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 638 | 215.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 659 | 215.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 671 | 215.75 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 8 | 13 |
| 675 | 215.77 | temperature | 20.0 | 10 | < th | dose independent | sin | 21 | NA |
| 676 | 215.78 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 8 | 13 |
| 688 | 215.83 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 705 | 216.00 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 743 | 216.21 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 751 | 216.27 | atmosphere | 1000.0 | 720 | > th | dose dependent | rect. | 9 | 1 |
| 763 | 216.33 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 19 |
| 773 | 216.37 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 21 | 22 |
| 804 | 216.53 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 21 |
| 806 | 216.55 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 818 | 216.61 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 846 | 216.85 | humidity | 90.0 | 30 | < th | dose independent | rect. | 19 | 2 |
| 852 | 216.90 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 865 | 216.98 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 17 |
| 868 | 217.02 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 881 | 217.07 | wind | 7.0 | 90 | < th | dose independent | rect. | 21 | 22 |
| 920 | 217.27 | wind | 7.0 | 720 | < th | dose independent | rect. | 12 | 5 |
| 922 | 217.28 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 931 | 217.33 | wind | 3.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 935 | 217.34 | atmosphere | 1010.0 | 720 | > th | dose independent | rect. | 8 | 1 |
| 936 | 217.34 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 958 | 217.40 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 972 | 217.45 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 19 | 2 |
| 990 | 217.56 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 999 | 217.59 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |