Os12g0420200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NAD-dependent epimerase/dehydratase family protein.
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Os12g0420200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NAD-dependent epimerase/dehydratase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.68 | 0.409 | 16.5 | -0.0376 | 0.391 | 0.431 | 1.03 | 1.66 | -0.495 | 4.25 | 0.07743 | 4464 | -- | -- |
| 76.35 | 0.407 | 16.5 | -0.221 | 0.353 | 0.386 | 0.86 | -- | -0.542 | 4.18 | 1.497 | 15779 | -- | -- |
| 78.35 | 0.412 | 16.5 | -0.0543 | 0.398 | 0.402 | -- | 1.57 | -0.495 | 3.64 | 0.4424 | 4478 | -- | -- |
| 77.87 | 0.411 | 16.5 | -0.178 | 0.386 | 0.434 | -- | -- | -0.575 | 3.63 | 2.028 | 18565 | -- | -- |
| 86.65 | 0.434 | 16.5 | 0.0219 | -- | 0.393 | -- | 1.41 | -0.481 | -- | 0.488 | 7136 | -- | -- |
| 80.97 | 0.422 | 16.4 | -0.202 | 0.386 | -- | 0.919 | -- | -0.458 | 4.2 | -- | -- | -- | -- |
| 83.11 | 0.427 | 16.4 | -0.212 | 0.391 | -- | -- | -- | -0.463 | 3.6 | -- | -- | -- | -- |
| 85.88 | 0.432 | 16.5 | -0.162 | -- | 0.449 | -- | -- | -0.561 | -- | 1.532 | 18565 | -- | -- |
| 78.58 | 0.413 | 16.5 | -- | 0.386 | 0.446 | -- | -- | -0.575 | 3.67 | 3.543 | 18582 | -- | -- |
| 91.62 | 0.447 | 16.4 | -0.196 | -- | -- | -- | -- | -0.453 | -- | -- | -- | -- | -- |
| 84.3 | 0.429 | 16.4 | -- | 0.387 | -- | -- | -- | -0.439 | 3.6 | -- | -- | -- | -- |
| 86.4 | 0.433 | 16.5 | -- | -- | 0.464 | -- | -- | -0.552 | -- | 4.106 | 18565 | -- | -- |
| 92.63 | 0.449 | 16.4 | -- | -- | -- | -- | -- | -0.431 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 3 | 72.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 6 | 72.27 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 7 | 72.27 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 8 | 72.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 13 | 72.39 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 14 | 72.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 18 | 72.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 19 | 72.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 23 | 72.59 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 46 | 72.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 54 | 72.89 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 58 | 72.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 59 | 72.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 60 | 72.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 18 |
| 61 | 72.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 62 | 72.93 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 65 | 72.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 68 | 72.97 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 73 | 73.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 85 | 73.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 18 |
| 89 | 73.06 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 90 | 73.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 94 | 73.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 18 |
| 96 | 73.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 18 |
| 99 | 73.10 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 102 | 73.10 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 104 | 73.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 116 | 73.15 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 127 | 73.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 129 | 73.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 131 | 73.20 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 143 | 73.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 145 | 73.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 151 | 73.26 | wind | 3.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 156 | 73.27 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 177 | 73.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 184 | 73.36 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 188 | 73.38 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 189 | 73.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 194 | 73.40 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 201 | 73.42 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 203 | 73.42 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 4 |
| 210 | 73.44 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 215 | 73.45 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 220 | 73.46 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 227 | 73.48 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 234 | 73.48 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 241 | 73.50 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 249 | 73.51 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 256 | 73.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 262 | 73.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 272 | 73.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 289 | 73.58 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 293 | 73.58 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 301 | 73.59 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 305 | 73.59 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 13 |
| 310 | 73.59 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 13 |
| 373 | 73.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 13 |
| 377 | 73.67 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 386 | 73.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 387 | 73.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 18 |
| 388 | 73.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 389 | 73.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 18 |
| 395 | 73.69 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 402 | 73.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 435 | 73.72 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 6 | NA |
| 463 | 73.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 470 | 73.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 11 |
| 510 | 73.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 523 | 73.80 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 529 | 73.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 531 | 73.81 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 539 | 73.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 541 | 73.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 21 |
| 550 | 73.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 21 |
| 565 | 73.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 573 | 73.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 585 | 73.86 | wind | 3.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 623 | 73.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 626 | 73.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 674 | 73.94 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 5 | NA |
| 675 | 73.94 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 5 | NA |
| 679 | 73.94 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 5 | NA |
| 705 | 73.97 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 800 | 74.03 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 821 | 74.05 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 874 | 74.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 923 | 74.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 924 | 74.12 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 945 | 74.13 | wind | 3.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 967 | 74.14 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |