Os12g0420100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-glucosidase.
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Os12g0420100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-glucosidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.24 | 0.578 | 2.95 | -0.215 | 0.161 | 1.53 | -0.376 | -0.5 | -0.0162 | 10.8 | 1015 | 10 | -- | -- |
| 154.37 | 0.583 | 2.95 | -0.223 | 0.162 | 1.52 | -0.34 | -- | -0.0176 | 10.7 | 1015 | 16 | -- | -- |
| 154.77 | 0.584 | 2.95 | -0.234 | 0.167 | 1.53 | -- | -0.301 | -0.0186 | 10.1 | 1015 | 13 | -- | -- |
| 154.82 | 0.583 | 2.95 | -0.238 | 0.167 | 1.52 | -- | -- | -0.0193 | 10.1 | 1015 | 23 | -- | -- |
| 156.43 | 0.586 | 2.95 | -0.236 | -- | 1.45 | -- | -0.299 | -0.0198 | -- | 1015 | 23 | -- | -- |
| 163.4 | 0.599 | 2.95 | -0.224 | 0.114 | -- | -0.356 | -- | -0.0351 | 10.6 | -- | -- | -- | -- |
| 163.84 | 0.599 | 2.95 | -0.24 | 0.124 | -- | -- | -- | -0.0371 | 9.45 | -- | -- | -- | -- |
| 156.48 | 0.585 | 2.95 | -0.24 | -- | 1.45 | -- | -- | -0.0205 | -- | 1015 | 23 | -- | -- |
| 156.31 | 0.585 | 2.94 | -- | 0.168 | 1.53 | -- | -- | 0.00719 | 10.2 | 1015 | 23 | -- | -- |
| 164.74 | 0.6 | 2.96 | -0.241 | -- | -- | -- | -- | -0.0367 | -- | -- | -- | -- | -- |
| 165.36 | 0.602 | 2.95 | -- | 0.124 | -- | -- | -- | -0.0104 | 9.6 | -- | -- | -- | -- |
| 158 | 0.587 | 2.95 | -- | -- | 1.45 | -- | -- | 0.00617 | -- | 1015 | 31 | -- | -- |
| 166.27 | 0.602 | 2.95 | -- | -- | -- | -- | -- | -0.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.74 | wind | 3 | 10 | < th | dose independent | rect. | 12 | 1 |
| 3 | 151.72 | atmosphere | 1015 | 270 | < th | dose independent | rect. | 12 | 23 |
| 4 | 153.34 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 16 | 8 |
| 5 | 153.42 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 6 | 153.47 | atmosphere | 1015 | 270 | < th | dose independent | rect. | 9 | 23 |
| 10 | 153.93 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 9 | 15 |
| 11 | 154.04 | atmosphere | 1015 | 30 | < th | dose independent | sin | 11 | NA |
| 12 | 154.04 | atmosphere | 1015 | 270 | < th | dose independent | sin | 13 | NA |
| 16 | 154.05 | atmosphere | 1015 | 10 | < th | dose independent | sin | 22 | NA |
| 20 | 154.05 | atmosphere | 1015 | 270 | < th | dose independent | sin | 1 | NA |
| 21 | 154.05 | atmosphere | 1015 | 270 | < th | dose independent | rect. | 16 | 15 |
| 49 | 154.19 | radiation | 10 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 52 | 154.24 | atmosphere | 1015 | 10 | > th | dose independent | sin | 7 | NA |
| 148 | 154.24 | atmosphere | 1015 | 10 | > th | dose independent | no | NA | NA |
| 153 | 154.24 | atmosphere | 1015 | 10 | < th | dose independent | no | NA | NA |
| 157 | 154.24 | atmosphere | 1015 | 270 | > th | dose independent | rect. | 20 | 1 |
| 163 | 154.24 | atmosphere | 1015 | 10 | > th | dose independent | rect. | 23 | 1 |