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Os12g0416300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.78 (0.0136) R2 : 0.0504
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.141 (0.0287) R2dN8 : 0.065 R2N8 : 0.0504
σ : 0.256
deviance : 30.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.9 0.225 8.76 0.238 0.354 0.159 0.0763 1.48 0.172 4.26 20.4 9 -- --
24.35 0.232 8.79 -0.00819 0.381 0.264 -0.314 -- 0.106 4.19 24.15 12 -- --
22.91 0.223 8.76 0.23 0.354 0.157 -- 1.44 0.171 4.3 20.4 7 -- --
24.31 0.23 8.78 0.00363 0.36 0.366 -- -- 0.138 4.11 27.74 4 -- --
27.79 0.247 8.75 0.31 -- -0.126 -- 1.53 0.227 -- 20.4 7 -- --
25.44 0.236 8.78 0.0348 0.284 -- -0.403 -- 0.137 4.61 -- -- -- --
25.86 0.238 8.78 0.0374 0.283 -- -- -- 0.139 4.75 -- -- -- --
29.75 0.254 8.78 0.0789 -- -0.148 -- -- 0.167 -- 14.9 360 -- --
24.28 0.229 8.78 -- 0.361 0.355 -- -- 0.139 4.29 27.67 4 -- --
30.09 0.256 8.78 0.0481 -- -- -- -- 0.146 -- -- -- -- --
25.9 0.238 8.78 -- 0.283 -- -- -- 0.135 4.74 -- -- -- --
29.44 0.253 8.78 -- -- -0.177 -- -- 0.139 -- 25.72 441 -- --
30.15 0.256 8.78 -- -- -- -- -- 0.141 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.19 wind 5.0 4320 < th dose independent rect. 9 1
2 22.23 wind 5.0 4320 > th dose independent rect. 9 1
3 22.44 wind 5.0 4320 > th dose dependent rect. 9 1
4 22.47 temperature 10.0 10 > th dose dependent rect. 9 23
8 22.64 temperature 20.0 10 > th dose dependent rect. 9 19
12 22.68 temperature 20.0 10 > th dose dependent rect. 9 21
16 22.70 temperature 20.0 10 > th dose dependent rect. 5 23
18 22.72 temperature 20.0 4320 > th dose independent rect. 21 2
27 22.81 temperature 20.0 4320 < th dose independent rect. 21 2
32 22.83 temperature 20.0 10 > th dose dependent rect. 17 23
33 22.84 temperature 20.0 10 > th dose dependent rect. 7 21
35 22.84 temperature 10.0 10 > th dose dependent rect. 7 23
36 22.84 temperature 20.0 10 > th dose dependent rect. 7 23
40 22.85 temperature 20.0 10 > th dose dependent rect. 21 23
41 22.86 temperature 20.0 10 > th dose dependent sin 0 NA
48 22.87 temperature 20.0 10 > th dose dependent rect. 11 23
49 22.88 temperature 20.0 10 > th dose dependent rect. 9 7
56 22.90 temperature 20.0 4320 > th dose independent rect. 20 4
63 22.91 temperature 20.0 270 > th dose dependent rect. 21 16
68 22.93 temperature 20.0 4320 < th dose independent rect. 20 4
69 22.93 temperature 20.0 10 > th dose dependent no NA NA
72 22.93 temperature 10.0 10 > th dose dependent rect. 21 23
77 22.94 temperature 20.0 10 > th dose dependent rect. 3 23
79 22.94 temperature 20.0 10 > th dose dependent rect. 15 23
84 22.96 temperature 20.0 10 > th dose dependent rect. 1 23
88 22.96 temperature 20.0 10 > th dose dependent rect. 23 23
112 23.01 temperature 20.0 10 > th dose dependent rect. 13 23
127 23.04 temperature 20.0 10 > th dose dependent rect. 22 18
136 23.06 temperature 20.0 30 > th dose dependent rect. 9 10
145 23.07 temperature 20.0 10 > th dose dependent rect. 19 23
161 23.10 radiation 20.0 10 < th dose independent rect. 6 16
162 23.10 temperature 10.0 10 > th dose dependent no NA NA
166 23.10 temperature 20.0 10 > th dose dependent rect. 24 16
176 23.12 atmosphere 1005.0 14400 < th dose independent rect. 22 2
178 23.12 precipitation 0.1 14400 > th dose dependent rect. 16 2
210 23.14 temperature 30.0 10 < th dose dependent rect. 1 23
213 23.15 temperature 25.0 10 > th dose dependent rect. 9 5
220 23.15 temperature 10.0 10 > th dose dependent rect. 11 23
232 23.17 radiation 20.0 10 < th dose independent rect. 6 4
336 23.23 temperature 25.0 10 > th dose dependent rect. 7 9
337 23.23 temperature 25.0 10 > th dose dependent rect. 4 12
373 23.24 temperature 30.0 90 < th dose dependent rect. 23 23
388 23.25 temperature 30.0 10 < th dose dependent rect. 19 23
389 23.25 temperature 30.0 10 < th dose dependent rect. 23 23
404 23.26 temperature 30.0 10 < th dose dependent rect. 13 23
409 23.27 wind 5.0 1440 > th dose independent rect. 20 15
421 23.27 temperature 30.0 10 < th dose dependent rect. 3 23
444 23.29 temperature 30.0 10 < th dose dependent no NA NA
471 23.30 wind 5.0 1440 < th dose independent rect. 20 15
504 23.31 temperature 25.0 90 > th dose dependent rect. 4 11
524 23.32 temperature 20.0 270 > th dose dependent rect. 9 2
526 23.32 temperature 25.0 90 > th dose dependent rect. 7 8
547 23.33 wind 3.0 1440 > th dose independent rect. 23 12
549 23.33 temperature 20.0 270 > th dose dependent rect. 7 6
554 23.33 wind 3.0 1440 > th dose dependent rect. 22 13
558 23.33 wind 3.0 1440 > th dose dependent rect. 20 15
572 23.33 temperature 30.0 10 < th dose dependent rect. 15 23
573 23.33 temperature 30.0 10 < th dose dependent rect. 17 23
574 23.33 temperature 30.0 10 < th dose dependent rect. 21 23
582 23.34 wind 5.0 1440 < th dose dependent rect. 10 1
605 23.34 temperature 30.0 10 < th dose dependent rect. 11 23
614 23.35 temperature 25.0 270 > th dose independent rect. 22 15
675 23.37 humidity 50.0 4320 > th dose independent rect. 7 3
686 23.37 temperature 25.0 10 < th dose dependent sin 22 NA
688 23.37 temperature 20.0 1440 > th dose dependent rect. 4 1
706 23.38 wind 3.0 1440 < th dose independent rect. 23 12
709 23.38 temperature 30.0 30 < th dose independent rect. 6 16
733 23.38 temperature 30.0 10 < th dose dependent rect. 9 23
734 23.39 atmosphere 1005.0 14400 < th dose independent rect. 2 1
746 23.39 wind 5.0 4320 > th dose dependent rect. 20 5
772 23.40 atmosphere 1005.0 14400 > th dose independent rect. 2 1
786 23.40 wind 9.0 1440 < th dose dependent rect. 8 1
789 23.40 atmosphere 995.0 30 > th dose dependent rect. 6 3
886 23.42 temperature 30.0 10 < th dose dependent rect. 7 23
912 23.43 wind 7.0 1440 < th dose dependent rect. 8 3
960 23.44 radiation 20.0 10 < th dose independent rect. 16 18
992 23.45 atmosphere 1005.0 14400 > th dose independent rect. 22 2
995 23.45 wind 5.0 4320 > th dose independent rect. 20 4