Os12g0411700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os12g0411700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.49 | 0.621 | 9.72 | -2.86 | 0.624 | -2.37 | 1.26 | 0.378 | -0.312 | 5.59 | 1.548 | 1462 | -- | -- |
| 173.78 | 0.614 | 9.72 | -2.79 | 0.655 | -2.43 | 1.28 | -- | -0.307 | 5.12 | 1.601 | 1479 | -- | -- |
| 177.58 | 0.621 | 9.72 | -2.82 | 0.654 | -2.41 | -- | 0.499 | -0.323 | 5.35 | 1.6 | 1475 | -- | -- |
| 174.1 | 0.615 | 9.73 | -2.78 | 0.901 | -2.8 | -- | -- | -0.353 | 3.67 | 1.601 | 1540 | -- | -- |
| 198.81 | 0.657 | 9.72 | -2.82 | -- | -2.36 | -- | 0.461 | -0.301 | -- | 1.6 | 1462 | -- | -- |
| 254.09 | 0.747 | 9.64 | -2.44 | 0.671 | -- | 1.32 | -- | 0.0273 | 6.08 | -- | -- | -- | -- |
| 257.93 | 0.752 | 9.64 | -2.42 | 0.682 | -- | -- | -- | 0.0236 | 6.54 | -- | -- | -- | -- |
| 199.01 | 0.657 | 9.72 | -2.77 | -- | -2.39 | -- | -- | -0.296 | -- | 1.6 | 1462 | -- | -- |
| 361.66 | 0.886 | 9.69 | -- | 0.828 | -1.83 | -- | -- | 0.0103 | 4.43 | 6.744 | 1599 | -- | -- |
| 282.16 | 0.785 | 9.65 | -2.4 | -- | -- | -- | -- | 0.0377 | -- | -- | -- | -- | -- |
| 412.35 | 0.95 | 9.58 | -- | 0.652 | -- | -- | -- | 0.293 | 6.75 | -- | -- | -- | -- |
| 372.81 | 0.899 | 9.69 | -- | -- | -1.77 | -- | -- | 0.0211 | -- | 7.296 | 2894 | -- | -- |
| 434.57 | 0.973 | 9.59 | -- | -- | -- | -- | -- | 0.304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 178.62 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 11 | 179.76 | humidity | 80 | 1440 | < th | dose independent | rect. | 4 | 16 |
| 16 | 179.93 | humidity | 60 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 28 | 180.20 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 42 | 180.41 | humidity | 80 | 1440 | > th | dose independent | rect. | 4 | 16 |
| 59 | 180.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 77 | 180.88 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 13 |
| 82 | 180.95 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 105 | 181.24 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 115 | 181.35 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 117 | 181.39 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 125 | 181.45 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 136 | 181.54 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 138 | 181.55 | radiation | 1 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 154 | 181.64 | humidity | 60 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 160 | 181.68 | humidity | 60 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 179 | 181.80 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 186 | 181.86 | radiation | 10 | 1440 | < th | dose dependent | sin | 15 | NA |
| 189 | 181.87 | humidity | 60 | 1440 | > th | dose dependent | sin | 20 | NA |
| 207 | 181.96 | radiation | 1 | 1440 | < th | dose independent | sin | 0 | NA |
| 228 | 182.08 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 21 |
| 229 | 182.09 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 247 | 182.14 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 263 | 182.18 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 264 | 182.18 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 273 | 182.20 | radiation | 1 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 299 | 182.29 | humidity | 80 | 1440 | < th | dose independent | rect. | 4 | 12 |
| 341 | 182.42 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 357 | 182.50 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 408 | 182.72 | humidity | 60 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 413 | 182.75 | radiation | 1 | 1440 | > th | dose independent | sin | 0 | NA |
| 477 | 183.04 | humidity | 80 | 1440 | > th | dose independent | rect. | 4 | 12 |
| 490 | 183.10 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 509 | 183.15 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 692 | 183.97 | humidity | 60 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 736 | 184.23 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 745 | 184.31 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 761 | 184.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 763 | 184.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 795 | 184.51 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 813 | 184.57 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 20 |
| 836 | 184.68 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 862 | 184.77 | radiation | 1 | 1440 | < th | dose independent | sin | 14 | NA |
| 922 | 185.01 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 931 | 185.07 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 8 |
| 989 | 185.28 | humidity | 90 | 1440 | < th | dose dependent | sin | 18 | NA |