Os12g0409700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os12g0409700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.02 | 0.534 | 6.98 | -1.54 | 0.782 | 0.877 | 0.379 | 0.363 | 0.468 | 6.56 | 19.82 | 82 | -- | -- |
| 129.58 | 0.53 | 6.98 | -1.54 | 0.777 | 0.867 | 0.343 | -- | 0.472 | 6.49 | 19.83 | 81 | -- | -- |
| 129.37 | 0.53 | 6.98 | -1.53 | 0.781 | 0.882 | -- | 0.326 | 0.467 | 6.61 | 19.82 | 81 | -- | -- |
| 129.84 | 0.531 | 6.98 | -1.55 | 0.784 | 0.886 | -- | -- | 0.467 | 6.62 | 19.83 | 81 | -- | -- |
| 142.1 | 0.555 | 6.98 | -1.42 | -- | 1.09 | -- | 0.474 | 0.54 | -- | 11.92 | 347 | -- | -- |
| 151.31 | 0.577 | 7 | -1.57 | 1.04 | -- | 0.702 | -- | 0.426 | 3.93 | -- | -- | -- | -- |
| 152.74 | 0.579 | 7 | -1.58 | 1.04 | -- | -- | -- | 0.422 | 3.97 | -- | -- | -- | -- |
| 142.37 | 0.556 | 6.98 | -1.41 | -- | 1.11 | -- | -- | 0.561 | -- | 11.97 | 348 | -- | -- |
| 185.76 | 0.635 | 6.94 | -- | 0.803 | 1 | -- | -- | 0.67 | 6.49 | 20 | 90 | -- | -- |
| 211.97 | 0.68 | 7.01 | -1.54 | -- | -- | -- | -- | 0.45 | -- | -- | -- | -- | -- |
| 218.72 | 0.692 | 6.96 | -- | 1.01 | -- | -- | -- | 0.598 | 3.99 | -- | -- | -- | -- |
| 195.34 | 0.651 | 6.94 | -- | -- | 1.18 | -- | -- | 0.725 | -- | 11.51 | 353 | -- | -- |
| 274.5 | 0.773 | 6.97 | -- | -- | -- | -- | -- | 0.621 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.69 | radiation | 20 | 90 | < th | dose independent | rect. | 4 | 19 |
| 2 | 124.95 | radiation | 20 | 90 | < th | dose independent | rect. | 3 | 22 |
| 12 | 127.70 | radiation | 40 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 13 | 127.77 | humidity | 70 | 10 | > th | dose independent | rect. | 4 | 18 |
| 14 | 127.77 | radiation | 20 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 16 | 128.01 | radiation | 10 | 270 | < th | dose independent | rect. | 3 | 15 |
| 23 | 128.26 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 24 | 128.37 | radiation | 20 | 90 | < th | dose independent | sin | 23 | NA |
| 30 | 128.65 | radiation | 30 | 90 | < th | dose dependent | sin | 23 | NA |
| 36 | 128.73 | radiation | 20 | 90 | > th | dose independent | rect. | 9 | 23 |
| 39 | 128.80 | radiation | 20 | 90 | < th | dose independent | rect. | 11 | 23 |
| 43 | 128.87 | radiation | 20 | 90 | > th | dose independent | rect. | 9 | 8 |
| 58 | 128.91 | radiation | 20 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 65 | 129.09 | radiation | 20 | 90 | < th | dose independent | rect. | 4 | 11 |
| 68 | 129.16 | radiation | 20 | 90 | > th | dose independent | sin | 22 | NA |
| 73 | 129.21 | radiation | 20 | 90 | < th | dose independent | rect. | 13 | 23 |
| 101 | 129.53 | radiation | 20 | 90 | < th | dose independent | no | NA | NA |
| 122 | 129.72 | radiation | 20 | 90 | > th | dose independent | rect. | 7 | 10 |
| 138 | 129.73 | radiation | 20 | 90 | > th | dose independent | no | NA | NA |
| 259 | 129.93 | radiation | 20 | 90 | < th | dose independent | rect. | 4 | 9 |
| 278 | 130.12 | radiation | 20 | 90 | < th | dose independent | rect. | 15 | 23 |
| 283 | 130.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 313 | 130.38 | humidity | 70 | 30 | > th | dose independent | rect. | 4 | 14 |
| 347 | 130.57 | radiation | 1 | 90 | > th | dose dependent | rect. | 9 | 9 |
| 372 | 130.68 | humidity | 50 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 377 | 130.72 | humidity | 70 | 10 | > th | dose independent | rect. | 4 | 12 |
| 388 | 130.82 | radiation | 40 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 391 | 130.85 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 393 | 130.86 | radiation | 1 | 90 | > th | dose dependent | rect. | 7 | 11 |
| 427 | 131.11 | humidity | 70 | 10 | > th | dose independent | rect. | 4 | 10 |
| 481 | 131.44 | humidity | 70 | 270 | > th | dose independent | rect. | 2 | 17 |
| 486 | 131.47 | radiation | 1 | 90 | > th | dose dependent | sin | 22 | NA |
| 521 | 131.67 | humidity | 70 | 10 | > th | dose independent | rect. | 4 | 8 |
| 530 | 131.70 | radiation | 40 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 533 | 131.71 | radiation | 20 | 90 | < th | dose independent | rect. | 17 | 23 |
| 541 | 131.77 | radiation | 20 | 90 | > th | dose independent | rect. | 14 | 23 |
| 548 | 131.81 | humidity | 90 | 30 | < th | dose dependent | rect. | 9 | 8 |
| 611 | 132.20 | radiation | 40 | 90 | < th | dose dependent | no | NA | NA |
| 613 | 132.22 | radiation | 20 | 90 | < th | dose independent | rect. | 11 | 12 |
| 733 | 132.76 | radiation | 20 | 270 | < th | dose independent | rect. | 13 | 18 |
| 775 | 132.79 | radiation | 1 | 90 | > th | dose dependent | no | NA | NA |
| 861 | 132.97 | radiation | 20 | 10 | < th | dose independent | rect. | 4 | 10 |
| 892 | 133.07 | radiation | 40 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 897 | 133.09 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 964 | 133.23 | radiation | 40 | 90 | < th | dose dependent | rect. | 15 | 23 |