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Os12g0299300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0248) R2 : 0.732
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.87 (0.0597) R2dC : 0.596 R2C : 0.508
β3 : 0.707 (0.0638) R2dE : 0.0746 R2E : 0.0221
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.67 (0.0526) R2dN8 : 0.125 R2N8 : 0.121
σ : 0.465
deviance : 99.49
__
_____
C
peak time of C : 23.2
E
wheather : temperature
threshold : 29.73
memory length : 1282
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
96.08 0.461 12.7 -0.946 1.86 0.282 0.478 3.48 0.545 23.3 29.9 1331 -- --
98.37 0.462 12.6 -0.23 1.81 0.597 0.586 -- 0.603 23.2 30 1324 -- --
96.83 0.458 12.7 -1.06 1.84 0.263 -- 3.44 0.538 23.2 29.69 1391 -- --
98.37 0.462 12.6 -0.205 1.86 0.67 -- -- 0.656 23.2 29.8 1282 -- --
299.78 0.811 12.5 -0.435 -- 0.565 -- 1.33 0.69 -- 29.69 1391 -- --
120.7 0.515 12.6 -0.417 1.79 -- 0.302 -- 0.702 23.1 -- -- -- --
121.09 0.515 12.6 -0.429 1.79 -- -- -- 0.701 23.1 -- -- -- --
300.92 0.811 12.5 -0.299 -- 0.653 -- -- 0.717 -- 29.69 1391 -- --
99.49 0.465 12.6 -- 1.87 0.707 -- -- 0.67 23.2 29.73 1282 -- --
320.71 0.837 12.5 -0.387 -- -- -- -- 0.715 -- -- -- -- --
125.95 0.525 12.6 -- 1.79 -- -- -- 0.748 23.1 -- -- -- --
303.25 0.814 12.5 -- -- 0.675 -- -- 0.75 -- 29.6 1589 -- --
324.67 0.841 12.5 -- -- -- -- -- 0.758 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.27 wind 3.0 43200 > th dose dependent rect. 18 14
2 93.61 wind 9.0 43200 < th dose independent rect. 20 18
3 93.69 wind 7.0 43200 > th dose independent rect. 11 3
4 93.72 wind 3.0 43200 > th dose dependent sin 11 NA
7 93.76 precipitation 0.1 43200 > th dose dependent rect. 15 6
10 93.87 wind 7.0 43200 > th dose independent rect. 17 21
12 93.94 wind 7.0 43200 > th dose dependent rect. 19 19
13 93.97 wind 7.0 43200 > th dose dependent rect. 10 4
17 94.05 wind 7.0 43200 < th dose independent rect. 17 21
21 94.10 wind 7.0 43200 < th dose independent rect. 11 3
26 94.13 precipitation 0.1 43200 > th dose dependent rect. 13 8
34 94.18 wind 7.0 43200 > th dose dependent rect. 17 21
39 94.21 wind 3.0 43200 > th dose dependent rect. 6 1
42 94.23 wind 3.0 43200 > th dose dependent rect. 2 13
47 94.30 wind 3.0 43200 > th dose dependent sin 4 NA
64 94.54 wind 7.0 43200 > th dose independent rect. 6 8
73 94.59 wind 5.0 43200 < th dose independent rect. 17 17
80 94.64 wind 3.0 43200 > th dose dependent rect. 20 19
84 94.70 wind 5.0 43200 < th dose independent rect. 17 15
86 94.70 wind 9.0 43200 < th dose independent rect. 19 23
87 94.70 wind 7.0 43200 > th dose dependent rect. 12 1
96 94.75 precipitation 0.1 43200 > th dose dependent rect. 20 1
113 94.84 wind 7.0 43200 > th dose independent sin 4 NA
115 94.84 precipitation 0.1 43200 > th dose dependent rect. 13 5
117 94.86 wind 7.0 43200 > th dose independent rect. 3 12
131 94.92 precipitation 0.1 43200 < th dose independent rect. 19 2
132 94.92 precipitation 0.1 43200 < th dose dependent rect. 19 2
133 94.93 wind 7.0 43200 < th dose independent rect. 6 8
135 94.94 wind 5.0 43200 < th dose independent sin 11 NA
138 94.95 precipitation 0.1 43200 > th dose independent rect. 19 2
140 94.96 wind 5.0 43200 > th dose independent rect. 17 17
150 95.03 wind 7.0 43200 < th dose independent sin 4 NA
159 95.06 wind 7.0 43200 < th dose independent rect. 3 12
167 95.11 wind 5.0 43200 > th dose independent rect. 17 15
185 95.17 wind 9.0 43200 < th dose independent rect. 10 20
225 95.29 humidity 80.0 43200 < th dose independent rect. 22 1
238 95.33 wind 5.0 43200 > th dose independent rect. 6 1
240 95.34 humidity 60.0 1440 < th dose independent rect. 12 1
252 95.38 precipitation 0.1 43200 < th dose independent rect. 17 4
258 95.38 precipitation 0.1 43200 < th dose dependent rect. 17 4
275 95.45 wind 5.0 43200 > th dose independent sin 11 NA
276 95.45 precipitation 0.1 43200 < th dose independent rect. 16 2
278 95.45 precipitation 0.1 43200 < th dose dependent rect. 16 2
283 95.47 precipitation 0.1 43200 > th dose independent rect. 16 2
284 95.47 precipitation 0.1 43200 > th dose independent rect. 17 4
303 95.54 humidity 60.0 1440 > th dose independent rect. 12 1
306 95.55 precipitation 0.1 43200 > th dose dependent rect. 18 3
316 95.58 wind 9.0 43200 < th dose independent rect. 10 14
317 95.58 wind 9.0 43200 < th dose independent rect. 10 16
328 95.62 wind 5.0 43200 < th dose independent rect. 6 1
329 95.62 radiation 10.0 43200 > th dose independent rect. 8 2
330 95.62 humidity 50.0 14400 > th dose independent rect. 15 3
340 95.64 radiation 20.0 4320 > th dose independent rect. 7 1
350 95.67 wind 9.0 43200 < th dose independent rect. 3 21
354 95.68 wind 9.0 43200 < th dose independent rect. 3 23
357 95.69 wind 9.0 43200 < th dose independent rect. 1 23
359 95.70 humidity 50.0 14400 > th dose independent rect. 15 16
365 95.71 humidity 50.0 14400 > th dose independent rect. 15 14
371 95.72 wind 9.0 43200 < th dose independent no NA NA
389 95.76 humidity 50.0 14400 > th dose independent rect. 15 8
404 95.77 wind 9.0 43200 < th dose dependent rect. 2 12
426 95.84 wind 9.0 43200 > th dose independent rect. 10 20
429 95.84 wind 7.0 43200 > th dose dependent rect. 10 20
440 95.86 wind 9.0 43200 < th dose dependent sin 6 NA
443 95.87 wind 9.0 43200 > th dose dependent rect. 14 4
485 95.95 humidity 50.0 14400 < th dose independent rect. 15 3
503 95.96 wind 9.0 43200 > th dose dependent rect. 14 16
519 95.98 wind 9.0 43200 < th dose independent rect. 12 23
573 96.06 humidity 60.0 1440 > th dose independent rect. 11 4
627 96.12 wind 9.0 43200 < th dose dependent rect. 20 14
649 96.17 wind 9.0 43200 < th dose independent sin 14 NA
658 96.18 radiation 10.0 43200 > th dose independent rect. 7 4
665 96.19 temperature 30.0 1440 < th dose independent rect. 18 22
668 96.19 wind 9.0 43200 < th dose dependent rect. 4 6
671 96.19 wind 9.0 43200 < th dose dependent rect. 20 12
691 96.22 wind 1.0 43200 > th dose dependent rect. 4 6
695 96.22 wind 7.0 43200 > th dose dependent rect. 1 23
698 96.23 wind 7.0 43200 > th dose dependent no NA NA
705 96.24 radiation 30.0 1440 < th dose independent rect. 15 19
715 96.26 wind 3.0 43200 > th dose dependent rect. 21 1
733 96.29 temperature 30.0 1440 < th dose independent rect. 11 21
740 96.30 wind 9.0 43200 > th dose independent rect. 10 16
742 96.30 temperature 30.0 1440 < th dose independent rect. 11 18
764 96.32 temperature 30.0 1440 < th dose independent rect. 11 8
771 96.32 temperature 30.0 1440 < th dose independent rect. 11 16
780 96.33 wind 9.0 43200 > th dose independent rect. 10 14
860 96.41 temperature 30.0 1440 < th dose independent rect. 9 7
870 96.42 temperature 30.0 1440 < th dose independent sin 18 NA
887 96.43 wind 9.0 43200 < th dose dependent rect. 1 9
894 96.44 temperature 30.0 1440 < th dose independent rect. 13 23
934 96.48 radiation 20.0 43200 > th dose independent rect. 11 1
945 96.48 temperature 30.0 1440 < th dose independent rect. 2 14
952 96.48 wind 9.0 43200 > th dose independent rect. 1 22
960 96.49 temperature 30.0 1440 < th dose independent rect. 4 12
976 96.49 wind 9.0 43200 < th dose dependent rect. 4 3
984 96.50 temperature 30.0 1440 < th dose independent rect. 11 4
986 96.50 temperature 30.0 1440 < th dose independent rect. 6 10
989 96.50 wind 9.0 43200 > th dose independent rect. 3 20
993 96.50 wind 9.0 43200 > th dose independent rect. 3 23
996 96.51 wind 9.0 43200 > th dose independent no NA NA