FiT-DB / Search/ Help/ Sample detail

Os12g0297400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0198) R2 : 0.614
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.31 (0.0494) R2dC : 0.598 R2C : 0.586
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.214 (0.0418) R2dN8 : 0.0288 R2N8 : 0.0165
σ : 0.374
deviance : 64.07
__
_____
C
peak time of C : 14.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.85 0.354 10.3 0.184 1.41 -1.56 -0.167 2.21 0.188 15.2 49.99 319 -- --
57.55 0.353 10.3 0.135 1.41 -1.07 -0.142 -- 0.202 15.2 50 330 -- --
56.91 0.351 10.3 0.186 1.41 -1.57 -- 2.16 0.184 15.2 49.9 340 -- --
57.47 0.353 10.3 0.128 1.41 -0.805 -- -- 0.182 15.2 51.28 402 -- --
152.66 0.575 10.3 0.318 -- -1.46 -- 2.55 0.0883 -- 50 2482 -- --
63.51 0.374 10.3 0.0501 1.31 -- -0.392 -- 0.221 14.9 -- -- -- --
64.03 0.375 10.3 0.0413 1.31 -- -- -- 0.219 14.9 -- -- -- --
151.8 0.574 10.3 0.138 -- -0.694 -- -- 0.121 -- 53 2481 -- --
57.82 0.354 10.3 -- 1.41 -0.593 -- -- 0.168 15.2 52.27 424 -- --
163.32 0.597 10.3 -0.0148 -- -- -- -- 0.185 -- -- -- -- --
64.07 0.374 10.3 -- 1.31 -- -- -- 0.214 14.9 -- -- -- --
117.23 0.506 10.3 -- -- 0.643 -- -- 0.217 -- 78 2588 -- --
163.32 0.597 10.3 -- -- -- -- -- 0.187 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.22 humidity 50.0 270 > th dose independent rect. 9 16
2 51.46 humidity 50.0 270 > th dose independent rect. 18 23
3 51.64 temperature 15.0 270 > th dose independent rect. 2 18
6 52.09 humidity 50.0 270 > th dose independent rect. 7 9
9 52.15 temperature 15.0 270 > th dose independent rect. 3 16
10 52.16 radiation 1.0 270 < th dose dependent rect. 5 22
15 52.40 temperature 15.0 270 > th dose independent rect. 1 20
16 52.42 precipitation 0.1 270 < th dose independent rect. 2 18
17 52.42 precipitation 0.1 270 < th dose dependent rect. 2 18
18 52.45 precipitation 0.1 270 < th dose independent rect. 15 16
19 52.45 precipitation 0.1 270 < th dose dependent rect. 15 16
20 52.46 temperature 10.0 30 > th dose dependent rect. 17 16
23 52.63 humidity 50.0 270 > th dose independent rect. 6 21
25 52.64 humidity 70.0 270 > th dose independent rect. 19 8
32 52.76 temperature 15.0 30 > th dose independent rect. 17 16
35 52.81 humidity 50.0 90 > th dose independent rect. 9 8
40 52.90 wind 1.0 270 > th dose independent rect. 2 18
46 52.97 precipitation 0.1 270 < th dose independent rect. 3 16
48 52.97 precipitation 0.1 270 < th dose dependent rect. 3 16
51 53.04 temperature 10.0 270 > th dose dependent rect. 15 16
55 53.06 precipitation 0.1 30 < th dose independent rect. 17 16
57 53.06 precipitation 0.1 30 < th dose dependent rect. 17 16
59 53.12 atmosphere 995.0 30 > th dose independent rect. 17 16
62 53.14 temperature 15.0 270 > th dose independent rect. 15 16
63 53.15 radiation 40.0 30 < th dose independent rect. 17 16
66 53.17 radiation 40.0 270 < th dose independent rect. 15 16
67 53.19 wind 7.0 270 < th dose independent rect. 20 6
68 53.19 atmosphere 995.0 30 > th dose dependent rect. 9 8
69 53.20 temperature 10.0 270 > th dose independent rect. 7 8
70 53.20 atmosphere 1015.0 270 < th dose independent rect. 7 8
76 53.25 atmosphere 995.0 30 > th dose independent rect. 9 8
79 53.27 precipitation 0.1 270 < th dose independent rect. 20 6
80 53.27 precipitation 0.1 270 < th dose dependent rect. 20 6
83 53.28 temperature 10.0 270 > th dose independent rect. 20 6
84 53.28 temperature 30.0 270 < th dose independent rect. 20 6
85 53.28 humidity 50.0 270 > th dose independent rect. 20 6
88 53.28 atmosphere 995.0 270 > th dose independent rect. 20 6
89 53.28 radiation 1.0 270 < th dose independent rect. 20 6
95 53.28 atmosphere 1015.0 270 < th dose independent rect. 2 18
96 53.28 radiation 1.0 270 < th dose dependent rect. 20 6
101 53.29 precipitation 0.1 270 < th dose independent rect. 7 8
102 53.29 precipitation 0.1 270 < th dose dependent rect. 7 8
103 53.30 atmosphere 995.0 270 > th dose independent rect. 7 8
106 53.32 temperature 10.0 30 > th dose independent rect. 9 8
108 53.32 atmosphere 1015.0 30 < th dose independent rect. 9 8
109 53.32 precipitation 0.1 30 < th dose independent rect. 9 8
111 53.32 precipitation 0.1 30 < th dose dependent rect. 9 8
112 53.32 temperature 10.0 270 > th dose dependent rect. 2 18
113 53.33 humidity 50.0 270 > th dose dependent rect. 19 7
116 53.36 temperature 10.0 10 > th dose dependent rect. 4 18
128 53.40 temperature 10.0 270 > th dose dependent rect. 15 5
134 53.43 wind 9.0 270 < th dose independent rect. 2 18
135 53.44 wind 9.0 30 < th dose independent rect. 17 16
136 53.44 atmosphere 995.0 270 > th dose independent rect. 15 16
139 53.46 wind 9.0 270 < th dose independent rect. 7 8
141 53.49 atmosphere 995.0 270 > th dose independent rect. 2 18
145 53.52 wind 1.0 270 > th dose independent rect. 13 8
147 53.53 wind 9.0 270 < th dose independent rect. 15 16
151 53.58 wind 1.0 270 > th dose independent rect. 15 16
153 53.58 radiation 1.0 270 < th dose independent rect. 6 21
154 53.60 humidity 70.0 270 > th dose independent rect. 1 8
158 53.61 wind 9.0 90 < th dose dependent rect. 3 18
167 53.65 temperature 10.0 270 > th dose independent rect. 19 8
168 53.65 temperature 30.0 270 < th dose independent rect. 19 8
169 53.65 humidity 50.0 270 > th dose independent rect. 19 8
170 53.65 atmosphere 995.0 270 > th dose independent rect. 19 8
171 53.65 radiation 1.0 270 < th dose independent rect. 19 8
177 53.65 atmosphere 1015.0 270 < th dose independent rect. 3 16
178 53.65 radiation 1.0 270 < th dose dependent rect. 19 8
186 53.66 temperature 10.0 90 > th dose dependent rect. 3 6
201 53.67 wind 5.0 10 < th dose independent rect. 3 19
208 53.69 wind 1.0 30 > th dose independent rect. 9 8
210 53.69 temperature 15.0 270 > th dose independent rect. 13 8
212 53.71 humidity 70.0 90 > th dose independent rect. 3 6
214 53.73 wind 5.0 90 < th dose independent rect. 3 6
216 53.75 precipitation 0.1 270 < th dose independent rect. 13 8
218 53.75 precipitation 0.1 270 < th dose dependent rect. 13 8
229 53.79 atmosphere 1015.0 30 < th dose independent rect. 17 16
233 53.80 temperature 10.0 270 > th dose dependent rect. 1 7
237 53.84 wind 9.0 30 < th dose independent rect. 9 8
238 53.86 radiation 30.0 90 < th dose independent rect. 3 6
248 53.89 precipitation 0.1 270 < th dose independent rect. 14 6
250 53.89 humidity 50.0 10 > th dose independent rect. 17 16
253 53.89 precipitation 0.1 270 < th dose dependent rect. 14 6
254 53.90 precipitation 0.1 270 < th dose independent rect. 1 8
258 53.90 precipitation 0.1 270 < th dose dependent rect. 1 8
276 53.93 wind 7.0 270 < th dose independent rect. 1 8
309 54.03 precipitation 0.1 90 < th dose independent rect. 3 6
311 54.03 precipitation 0.1 90 < th dose dependent rect. 3 6
313 54.04 humidity 90.0 270 < th dose dependent rect. 15 5
316 54.05 atmosphere 1010.0 270 < th dose independent rect. 13 8
337 54.10 atmosphere 1010.0 270 < th dose independent rect. 14 6
343 54.11 temperature 15.0 270 > th dose independent rect. 14 6
374 54.14 wind 1.0 270 > th dose independent rect. 1 7
376 54.14 humidity 50.0 270 > th dose independent rect. 20 19
378 54.15 temperature 30.0 90 < th dose independent rect. 3 6
379 54.15 temperature 30.0 270 < th dose independent rect. 1 8
390 54.18 temperature 10.0 270 > th dose independent rect. 21 16
391 54.18 atmosphere 995.0 270 > th dose independent rect. 21 16
405 54.22 radiation 40.0 270 < th dose independent rect. 13 7
417 54.24 temperature 10.0 270 > th dose independent rect. 1 8
420 54.24 atmosphere 995.0 270 > th dose independent rect. 1 8
421 54.24 atmosphere 1015.0 270 < th dose independent rect. 1 8
423 54.24 radiation 1.0 270 > th dose independent rect. 16 14
424 54.24 temperature 10.0 270 > th dose independent rect. 9 16
459 54.28 wind 9.0 270 < th dose independent rect. 9 16
460 54.28 temperature 10.0 270 > th dose independent rect. 20 18
461 54.28 atmosphere 995.0 270 > th dose independent rect. 20 18
466 54.30 temperature 10.0 90 > th dose independent rect. 3 6
469 54.30 atmosphere 995.0 90 > th dose independent rect. 3 6
470 54.30 atmosphere 1015.0 90 < th dose independent rect. 3 6
480 54.30 temperature 10.0 90 > th dose independent rect. 9 18
481 54.30 radiation 20.0 90 < th dose independent rect. 3 18
483 54.31 radiation 1.0 30 > th dose independent rect. 9 8
489 54.32 wind 9.0 10 < th dose dependent rect. 3 19
514 54.35 humidity 50.0 270 > th dose dependent rect. 9 17
537 54.37 precipitation 0.1 270 < th dose independent rect. 23 23
540 54.37 precipitation 0.1 270 < th dose dependent rect. 23 23
546 54.38 radiation 40.0 90 < th dose dependent rect. 16 17
556 54.39 radiation 40.0 10 < th dose dependent rect. 17 16
571 54.42 humidity 50.0 270 > th dose dependent rect. 11 15
574 54.43 radiation 1.0 270 > th dose independent rect. 15 16
589 54.45 radiation 30.0 270 < th dose independent rect. 1 8
591 54.45 atmosphere 1015.0 270 < th dose independent rect. 15 16
597 54.46 wind 9.0 270 < th dose independent rect. 21 16
598 54.46 humidity 50.0 270 > th dose independent rect. 21 16
609 54.48 atmosphere 995.0 270 > th dose independent rect. 14 6
611 54.48 humidity 70.0 270 > th dose independent rect. 15 11
619 54.49 wind 9.0 270 < th dose independent rect. 20 18
625 54.50 wind 9.0 90 < th dose independent rect. 9 18
629 54.51 wind 9.0 270 < th dose independent rect. 14 6
631 54.51 wind 1.0 270 > th dose independent rect. 7 8
636 54.53 wind 1.0 270 > th dose independent rect. 20 6
640 54.53 radiation 1.0 270 < th dose dependent sin 14 NA
647 54.54 wind 9.0 90 < th dose dependent rect. 15 6
650 54.55 humidity 50.0 30 > th dose independent rect. 22 19
677 54.61 wind 1.0 90 > th dose independent rect. 3 6
679 54.61 wind 9.0 270 < th dose dependent rect. 15 4
685 54.62 precipitation 0.1 270 < th dose independent rect. 20 18
691 54.62 precipitation 0.1 270 < th dose dependent rect. 20 18
696 54.63 wind 9.0 90 < th dose dependent rect. 3 6
706 54.65 precipitation 0.1 270 < th dose independent rect. 21 16
709 54.65 precipitation 0.1 270 < th dose dependent rect. 21 16
710 54.65 atmosphere 995.0 90 > th dose dependent rect. 9 18
720 54.67 radiation 40.0 270 < th dose dependent rect. 1 8
730 54.69 wind 9.0 270 < th dose dependent rect. 20 6
750 54.70 humidity 90.0 270 < th dose dependent rect. 17 1
776 54.74 precipitation 0.1 10 < th dose independent rect. 3 6
781 54.74 precipitation 0.1 10 < th dose dependent rect. 3 6
789 54.75 temperature 10.0 10 > th dose dependent rect. 17 5
800 54.77 precipitation 0.1 90 < th dose independent rect. 9 18
803 54.77 precipitation 0.1 90 < th dose dependent rect. 9 18
816 54.80 humidity 90.0 10 < th dose independent rect. 4 5
830 54.83 radiation 10.0 10 < th dose independent rect. 4 18
871 54.89 precipitation 0.1 10 < th dose independent rect. 4 18
876 54.89 precipitation 0.1 10 < th dose dependent rect. 4 18
877 54.90 temperature 25.0 30 > th dose independent rect. 4 5
916 54.93 temperature 10.0 270 > th dose dependent rect. 17 1
918 54.93 radiation 40.0 90 < th dose dependent rect. 3 18
931 54.95 atmosphere 1005.0 90 > th dose independent rect. 9 8
937 54.95 radiation 30.0 10 < th dose dependent rect. 4 18
940 54.96 wind 9.0 10 < th dose independent rect. 22 6
941 54.96 temperature 10.0 10 > th dose independent rect. 22 6
942 54.96 temperature 30.0 10 < th dose independent rect. 22 6
943 54.96 humidity 50.0 10 > th dose independent rect. 22 6
946 54.96 atmosphere 995.0 10 > th dose independent rect. 22 6
948 54.96 radiation 1.0 10 < th dose independent rect. 22 6
954 54.96 temperature 10.0 10 > th dose independent rect. 4 18
956 54.96 atmosphere 1015.0 10 < th dose independent rect. 4 18
958 54.96 radiation 1.0 10 < th dose dependent rect. 22 6