Os12g0292400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment).
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Os12g0292400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.8 | 0.36 | 16.2 | -0.847 | 0.206 | -0.658 | 0.569 | -0.0248 | -0.653 | 1.4 | 997.7 | 10702 | -- | -- |
| 58.8 | 0.357 | 16.2 | -0.852 | 0.206 | -0.66 | 0.567 | -- | -0.654 | 1.39 | 997.7 | 10708 | -- | -- |
| 59.96 | 0.361 | 16.2 | -0.868 | 0.209 | -0.664 | -- | -0.017 | -0.657 | 0.39 | 998.3 | 10709 | -- | -- |
| 59.95 | 0.361 | 16.2 | -0.873 | 0.21 | -0.668 | -- | -- | -0.654 | 0.392 | 997.5 | 10705 | -- | -- |
| 62.69 | 0.369 | 16.2 | -0.85 | -- | -0.659 | -- | -0.077 | -0.652 | -- | 998.4 | 10703 | -- | -- |
| 67.76 | 0.386 | 16.2 | -0.699 | 0.208 | -- | 0.614 | -- | -0.649 | 1.51 | -- | -- | -- | -- |
| 69.12 | 0.389 | 16.2 | -0.719 | 0.212 | -- | -- | -- | -0.652 | 0.507 | -- | -- | -- | -- |
| 62.7 | 0.369 | 16.2 | -0.867 | -- | -0.662 | -- | -- | -0.656 | -- | 998.6 | 10709 | -- | -- |
| 78.71 | 0.413 | 16.1 | -- | 0.201 | -0.437 | -- | -- | -0.564 | 0.21 | 996.4 | 11311 | -- | -- |
| 71.94 | 0.396 | 16.2 | -0.711 | -- | -- | -- | -- | -0.648 | -- | -- | -- | -- | -- |
| 82.73 | 0.425 | 16.1 | -- | 0.202 | -- | -- | -- | -0.572 | 0.33 | -- | -- | -- | -- |
| 81.09 | 0.419 | 16.1 | -- | -- | -0.407 | -- | -- | -0.576 | -- | 1001 | 10848 | -- | -- |
| 85.28 | 0.431 | 16.1 | -- | -- | -- | -- | -- | -0.569 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 2 | 57.50 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 3 | 57.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 4 | 57.71 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 57.85 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 6 | 57.86 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 8 | 57.90 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 9 | 57.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 10 | 57.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 12 | 58.04 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 13 | 58.04 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 18 | 58.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 19 | 58.31 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 25 | 58.53 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 26 | 58.53 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 27 | 58.53 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 32 | 58.63 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 35 | 58.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 38 | 58.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 40 | 58.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 41 | 58.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 42 | 58.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 73 | 58.91 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 93 | 58.94 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 111 | 58.98 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 145 | 59.07 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 146 | 59.07 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 154 | 59.08 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 156 | 59.09 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 171 | 59.12 | wind | 5.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 172 | 59.12 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 175 | 59.13 | wind | 5.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 193 | 59.20 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 216 | 59.27 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 217 | 59.27 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 225 | 59.28 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 226 | 59.28 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 232 | 59.29 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 244 | 59.30 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 13 | 22 |
| 266 | 59.31 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 14 | 20 |
| 276 | 59.33 | humidity | 60.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 277 | 59.33 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 292 | 59.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 296 | 59.34 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 311 | 59.35 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 364 | 59.37 | humidity | 60.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 381 | 59.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 430 | 59.40 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 473 | 59.42 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 475 | 59.42 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 542 | 59.45 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 13 | 22 |
| 552 | 59.45 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 574 | 59.47 | humidity | 60.0 | 43200 | > th | dose independent | no | NA | NA |
| 604 | 59.49 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 636 | 59.50 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 662 | 59.52 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 694 | 59.54 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 749 | 59.57 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 754 | 59.57 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 20 |
| 766 | 59.58 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 787 | 59.59 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 816 | 59.60 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 820 | 59.61 | humidity | 60.0 | 43200 | < th | dose independent | no | NA | NA |
| 866 | 59.63 | wind | 9.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 878 | 59.63 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 11 | 7 |
| 882 | 59.64 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 892 | 59.64 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 893 | 59.64 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 910 | 59.66 | wind | 9.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 911 | 59.66 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 912 | 59.66 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 943 | 59.68 | wind | 9.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 949 | 59.69 | wind | 9.0 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 979 | 59.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 982 | 59.72 | wind | 9.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 986 | 59.72 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 989 | 59.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |