Os12g0290200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0290200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 244.48 | 0.735 | 6.94 | 0.102 | 3.5 | 2.37 | -0.205 | -1.18 | -0.807 | 21.1 | 22.24 | 508 | 2.54 | -- |
| 244.53 | 0.728 | 6.92 | 0.336 | 3.52 | 2.24 | -0.0633 | -- | -0.731 | 21.3 | 21.97 | 486 | 2.07 | -- |
| 244.04 | 0.728 | 6.95 | 0.124 | 3.59 | 2.38 | -- | -1.07 | -0.831 | 21.1 | 21.99 | 489 | 2.28 | -- |
| 244.35 | 0.728 | 6.9 | 0.37 | 3.54 | 2.27 | -- | -- | -0.703 | 21.3 | 21.9 | 483 | 2 | -- |
| 600.49 | 1.14 | 6.84 | -0.28 | -- | 3.37 | -- | -1.35 | -0.622 | -- | 25.06 | 985 | 0.595 | -- |
| 362.46 | 0.893 | 6.76 | 0.91 | 2.86 | -- | -0.287 | -- | -0.156 | 21.3 | -- | -- | -- | -- |
| 362.76 | 0.892 | 6.76 | 0.92 | 2.86 | -- | -- | -- | -0.156 | 21.3 | -- | -- | -- | -- |
| 576.84 | 1.12 | 6.77 | 0.00252 | -- | 2.88 | -- | -- | -0.549 | -- | 24.65 | 1022 | 1.3e-06 | -- |
| 248.13 | 0.734 | 6.9 | -- | 3.58 | 2.35 | -- | -- | -0.722 | 21.3 | 21.91 | 485 | 1.97 | -- |
| 838.31 | 1.35 | 6.68 | 0.932 | -- | -- | -- | -- | -0.169 | -- | -- | -- | -- | -- |
| 385.06 | 0.918 | 6.78 | -- | 2.86 | -- | -- | -- | -0.259 | 21.3 | -- | -- | -- | -- |
| 576.17 | 1.12 | 6.78 | -- | -- | 2.81 | -- | -- | -0.609 | -- | 24.5 | 1018 | 6.05e-05 | -- |
| 861.24 | 1.37 | 6.71 | -- | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 3 | 258.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 5 | 258.87 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 10 | 259.75 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 11 | 260.04 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 21 | 261.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 55 | 264.40 | temperature | 20 | 270 | > th | dose dependent | sin | 6 | NA |
| 65 | 265.29 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 107 | 268.03 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 120 | 268.51 | temperature | 10 | 270 | > th | dose dependent | sin | 6 | NA |
| 130 | 268.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 143 | 269.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 11 |
| 150 | 269.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 164 | 269.51 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 248 | 271.06 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 250 | 271.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 17 |
| 279 | 271.48 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 331 | 272.20 | temperature | 20 | 4320 | > th | dose dependent | sin | 11 | NA |
| 347 | 272.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 358 | 272.56 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 13 |
| 362 | 272.60 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 13 |
| 445 | 273.07 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 465 | 273.21 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 490 | 273.33 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 708 | 274.46 | temperature | 25 | 1440 | > th | dose independent | rect. | 23 | 22 |
| 746 | 274.65 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 751 | 274.68 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 776 | 274.81 | temperature | 25 | 4320 | < th | dose independent | sin | 8 | NA |
| 781 | 274.83 | temperature | 25 | 4320 | > th | dose independent | sin | 8 | NA |
| 823 | 275.01 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 916 | 275.36 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 958 | 275.62 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 976 | 275.69 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 988 | 275.73 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 23 |