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Os12g0288900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.7 (0.017) R2 : 0.36
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.605 (0.0444) R2dC : 0.261 R2C : 0.241
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.29 (0.0359) R2dN8 : 0.119 R2N8 : 0.0995
σ : 0.321
deviance : 47.22
__
_____
C
peak time of C : 17.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.71 0.256 8.7 -0.314 0.563 -0.521 0.228 0.571 -0.306 17.7 26.16 1200 -- --
29.78 0.254 8.72 -0.447 0.563 -0.452 0.229 -- -0.344 17.7 26.6 1203 -- --
29.83 0.254 8.7 -0.311 0.565 -0.525 -- 0.591 -0.308 17.7 26.3 1203 -- --
29.9 0.255 8.72 -0.453 0.562 -0.457 -- -- -0.343 17.7 26.5 1206 -- --
45.74 0.315 8.68 -0.28 -- -0.583 -- 0.579 -0.254 -- 24.54 1264 -- --
37.82 0.288 8.72 -0.589 0.592 -- 0.321 -- -0.357 17.1 -- -- -- --
38.08 0.289 8.72 -0.589 0.594 -- -- -- -0.356 17.2 -- -- -- --
45.86 0.315 8.7 -0.444 -- -0.507 -- -- -0.333 -- 25.83 1265 -- --
34.87 0.275 8.7 -- 0.567 -0.553 -- -- -0.268 17.8 25.59 1207 -- --
56.58 0.351 8.71 -0.61 -- -- -- -- -0.371 -- -- -- -- --
47.22 0.321 8.7 -- 0.605 -- -- -- -0.29 17.1 -- -- -- --
50.46 0.331 8.68 -- -- -0.639 -- -- -0.231 -- 24.31 1265 -- --
66.39 0.38 8.7 -- -- -- -- -- -0.303 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.70 wind 5.0 90 < th dose dependent rect. 3 6
6 28.03 wind 5.0 270 < th dose dependent rect. 1 6
10 28.29 wind 3.0 270 < th dose dependent rect. 3 2
17 28.44 wind 5.0 10 < th dose dependent rect. 3 6
25 28.55 wind 3.0 270 < th dose independent rect. 1 6
41 28.79 radiation 1.0 270 < th dose dependent rect. 5 21
42 28.81 wind 1.0 270 < th dose independent rect. 4 1
44 28.83 temperature 10.0 270 > th dose dependent rect. 13 17
45 28.84 temperature 25.0 720 > th dose dependent rect. 20 1
51 28.86 temperature 10.0 270 > th dose dependent rect. 1 6
52 28.88 humidity 60.0 270 > th dose dependent rect. 1 5
58 28.95 wind 3.0 90 < th dose independent rect. 3 6
62 28.96 atmosphere 1015.0 270 < th dose dependent rect. 1 5
64 28.97 atmosphere 1015.0 270 < th dose dependent rect. 3 2
65 28.99 precipitation 0.1 270 < th dose independent rect. 1 6
66 28.99 temperature 10.0 90 > th dose dependent rect. 3 5
67 28.99 precipitation 0.1 270 < th dose dependent rect. 1 6
69 29.00 temperature 15.0 270 > th dose independent rect. 13 17
71 29.00 atmosphere 1015.0 90 < th dose dependent rect. 3 5
81 29.03 temperature 30.0 90 < th dose dependent rect. 20 7
82 29.03 temperature 10.0 270 > th dose dependent rect. 24 8
85 29.06 temperature 25.0 720 > th dose dependent rect. 18 5
96 29.13 radiation 1.0 270 < th dose independent rect. 5 21
107 29.18 precipitation 0.1 270 < th dose independent rect. 24 8
113 29.18 precipitation 0.1 270 < th dose dependent rect. 24 8
127 29.27 precipitation 0.1 270 < th dose independent rect. 13 17
130 29.27 precipitation 0.1 270 < th dose dependent rect. 13 17
152 29.36 temperature 10.0 270 > th dose independent rect. 1 6
154 29.36 temperature 30.0 270 < th dose independent rect. 1 6
155 29.36 humidity 50.0 270 > th dose independent rect. 1 6
157 29.36 atmosphere 995.0 270 > th dose independent rect. 1 6
158 29.36 atmosphere 1015.0 270 < th dose independent rect. 1 6
159 29.36 radiation 30.0 270 < th dose independent rect. 1 6
161 29.36 temperature 10.0 270 > th dose independent rect. 7 18
176 29.38 precipitation 0.1 90 < th dose independent rect. 3 5
178 29.38 precipitation 0.1 90 < th dose dependent rect. 3 5
189 29.41 atmosphere 1010.0 90 < th dose independent rect. 3 6
191 29.41 atmosphere 1010.0 270 < th dose independent rect. 13 17
193 29.42 humidity 50.0 90 > th dose dependent rect. 3 6
199 29.43 humidity 70.0 270 > th dose dependent rect. 3 2
206 29.46 precipitation 0.1 270 < th dose independent rect. 2 15
207 29.46 radiation 40.0 270 < th dose dependent rect. 1 6
208 29.46 temperature 25.0 720 > th dose dependent rect. 18 14
209 29.46 precipitation 0.1 270 < th dose dependent rect. 2 15
210 29.47 wind 9.0 270 < th dose independent rect. 13 17
217 29.48 temperature 30.0 90 < th dose independent rect. 3 6
218 29.48 temperature 10.0 270 > th dose independent rect. 6 7
219 29.48 atmosphere 995.0 270 > th dose independent rect. 6 7
220 29.48 atmosphere 1015.0 270 < th dose independent rect. 6 7
223 29.48 wind 9.0 270 < th dose independent rect. 7 18
224 29.48 radiation 1.0 270 < th dose independent rect. 6 19
238 29.51 temperature 15.0 270 > th dose independent rect. 1 18
243 29.51 humidity 50.0 270 > th dose dependent rect. 18 7
245 29.52 wind 9.0 270 < th dose independent rect. 6 7
247 29.52 precipitation 0.1 270 < th dose independent rect. 6 7
249 29.52 precipitation 0.1 270 < th dose independent rect. 1 18
252 29.52 precipitation 0.1 270 < th dose dependent rect. 6 7
253 29.52 precipitation 0.1 270 < th dose dependent rect. 1 18
257 29.53 temperature 10.0 10 > th dose dependent rect. 3 6
283 29.57 precipitation 0.1 270 < th dose independent rect. 3 2
285 29.57 precipitation 0.1 270 < th dose dependent rect. 3 2
292 29.58 temperature 10.0 90 > th dose independent rect. 3 5
295 29.58 humidity 50.0 90 > th dose independent rect. 3 5
297 29.58 atmosphere 995.0 90 > th dose independent rect. 3 5
301 29.58 precipitation 0.1 90 < th dose independent rect. 8 19
304 29.58 precipitation 0.1 90 < th dose dependent rect. 8 19
306 29.59 temperature 10.0 270 > th dose independent rect. 24 8
308 29.59 temperature 30.0 270 < th dose independent rect. 24 8
309 29.59 humidity 50.0 270 > th dose independent rect. 24 8
311 29.59 atmosphere 995.0 270 > th dose independent rect. 24 8
312 29.59 atmosphere 1015.0 270 < th dose independent rect. 24 8
313 29.59 radiation 40.0 270 < th dose independent rect. 24 8
315 29.59 temperature 10.0 270 > th dose independent rect. 8 16
324 29.60 temperature 30.0 10 < th dose dependent rect. 20 8
337 29.62 radiation 40.0 90 < th dose independent rect. 3 6
350 29.62 precipitation 0.1 270 < th dose independent rect. 6 19
353 29.62 precipitation 0.1 270 < th dose dependent rect. 6 19
359 29.64 humidity 50.0 270 > th dose independent rect. 6 7
374 29.67 atmosphere 1010.0 270 < th dose independent rect. 12 8
382 29.67 radiation 1.0 270 < th dose dependent rect. 18 7
411 29.72 radiation 1.0 270 < th dose independent rect. 18 7
412 29.72 wind 9.0 270 < th dose independent rect. 8 16
417 29.72 temperature 10.0 10 > th dose dependent rect. 15 17
426 29.74 temperature 25.0 270 < th dose independent rect. 3 2
431 29.75 temperature 15.0 270 > th dose independent rect. 11 9
433 29.75 wind 9.0 270 < th dose independent rect. 1 17
434 29.75 temperature 15.0 270 > th dose dependent rect. 3 2
438 29.76 wind 1.0 270 > th dose independent rect. 20 16
448 29.78 wind 9.0 270 < th dose independent rect. 18 7
456 29.79 temperature 10.0 270 > th dose independent rect. 19 6
457 29.79 temperature 30.0 270 < th dose independent rect. 19 6
458 29.79 humidity 50.0 270 > th dose independent rect. 19 6
460 29.79 atmosphere 995.0 270 > th dose independent rect. 19 6
475 29.79 atmosphere 1015.0 270 < th dose independent rect. 1 17
513 29.83 radiation 1.0 270 < th dose dependent rect. 12 13
525 29.86 atmosphere 995.0 270 > th dose independent rect. 6 19
534 29.87 atmosphere 995.0 90 > th dose independent rect. 8 19
560 29.90 precipitation 0.1 10 < th dose independent rect. 3 6
561 29.90 wind 9.0 270 < th dose independent rect. 12 8
564 29.90 precipitation 0.1 10 < th dose dependent rect. 3 6
571 29.91 temperature 10.0 270 > th dose independent rect. 20 16
572 29.91 atmosphere 995.0 270 > th dose independent rect. 20 16
573 29.91 radiation 40.0 270 < th dose independent rect. 14 16
577 29.92 humidity 90.0 270 > th dose independent rect. 3 2
607 29.94 wind 9.0 270 < th dose independent rect. 20 16
614 29.95 precipitation 0.1 90 < th dose independent rect. 19 8
618 29.95 precipitation 0.1 90 < th dose dependent rect. 19 8
639 29.97 precipitation 0.1 270 < th dose independent rect. 12 8
649 29.97 precipitation 0.1 270 < th dose dependent rect. 12 8
666 29.99 precipitation 0.1 270 < th dose independent rect. 19 6
674 29.99 precipitation 0.1 270 < th dose dependent rect. 19 6
684 30.00 radiation 1.0 270 < th dose independent rect. 12 13
709 30.03 wind 1.0 270 > th dose independent rect. 12 8
748 30.05 humidity 50.0 270 > th dose independent rect. 20 15
765 30.07 wind 1.0 270 > th dose independent rect. 6 7
795 30.10 temperature 10.0 270 > th dose independent rect. 3 2
798 30.10 humidity 50.0 270 > th dose independent rect. 3 2
801 30.10 atmosphere 995.0 270 > th dose independent rect. 3 2
802 30.10 atmosphere 1010.0 270 < th dose independent rect. 3 2
804 30.10 radiation 20.0 270 < th dose independent rect. 3 2
811 30.10 temperature 10.0 270 > th dose independent rect. 5 22
825 30.11 radiation 30.0 270 < th dose dependent rect. 3 2
839 30.13 radiation 1.0 270 < th dose independent rect. 3 2
878 30.15 precipitation 0.1 10 < th dose independent rect. 9 18
884 30.15 precipitation 0.1 10 < th dose dependent rect. 9 18
906 30.19 humidity 50.0 270 > th dose independent rect. 6 19
916 30.20 temperature 10.0 10 > th dose independent rect. 3 6
919 30.20 temperature 30.0 10 < th dose independent rect. 3 6
920 30.20 humidity 50.0 10 > th dose independent rect. 3 6
923 30.20 atmosphere 995.0 10 > th dose independent rect. 3 6
925 30.20 atmosphere 1015.0 10 < th dose independent rect. 3 6
942 30.20 temperature 10.0 10 > th dose independent rect. 9 18