Os12g0285500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1671 family protein.
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Os12g0285500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1671 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.62 | 0.203 | 10.6 | 0.0967 | 0.545 | 0.399 | -0.0406 | 0.676 | 0.0842 | 23.9 | 29 | 1542 | -- | -- |
| 18.9 | 0.202 | 10.6 | 0.282 | 0.552 | 0.466 | -0.0123 | -- | 0.124 | 23.8 | 29.18 | 1516 | -- | -- |
| 18.61 | 0.201 | 10.6 | 0.102 | 0.546 | 0.397 | -- | 0.656 | 0.0852 | 23.9 | 28.97 | 1521 | -- | -- |
| 18.86 | 0.202 | 10.6 | 0.286 | 0.522 | 0.454 | -- | -- | 0.114 | 23.9 | 28.92 | 1517 | -- | -- |
| 33.66 | 0.272 | 10.6 | 0.167 | -- | 0.396 | -- | 0.511 | 0.0857 | -- | 28.97 | 1521 | -- | -- |
| 28.66 | 0.251 | 10.6 | 0.131 | 0.527 | -- | -0.0958 | -- | 0.0649 | 23.9 | -- | -- | -- | -- |
| 28.7 | 0.251 | 10.6 | 0.135 | 0.528 | -- | -- | -- | 0.0653 | 23.9 | -- | -- | -- | -- |
| 34.04 | 0.273 | 10.6 | 0.237 | -- | 0.424 | -- | -- | 0.105 | -- | 28.97 | 1521 | -- | -- |
| 20.91 | 0.213 | 10.6 | -- | 0.553 | 0.435 | -- | -- | 0.106 | 23.9 | 29 | 1538 | -- | -- |
| 46.24 | 0.318 | 10.6 | 0.151 | -- | -- | -- | -- | 0.0723 | -- | -- | -- | -- | -- |
| 29.18 | 0.253 | 10.6 | -- | 0.53 | -- | -- | -- | 0.0502 | 23.9 | -- | -- | -- | -- |
| 35.5 | 0.278 | 10.6 | -- | -- | 0.405 | -- | -- | 0.0775 | -- | 28.97 | 1521 | -- | -- |
| 46.84 | 0.319 | 10.6 | -- | -- | -- | -- | -- | 0.0555 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 2 | 18.19 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 6 | 18.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 19 | 18.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 13 |
| 40 | 18.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 41 | 18.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 18 |
| 70 | 18.71 | temperature | 25 | 1440 | > th | dose dependent | sin | 6 | NA |
| 117 | 18.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 125 | 18.83 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 146 | 18.90 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 157 | 18.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 164 | 18.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 183 | 18.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 221 | 18.97 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 285 | 19.00 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 318 | 19.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 320 | 19.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 331 | 19.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 372 | 19.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 383 | 19.15 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 394 | 19.17 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 450 | 19.23 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 454 | 19.24 | temperature | 30 | 1440 | < th | dose independent | sin | 5 | NA |
| 534 | 19.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 549 | 19.33 | temperature | 30 | 1440 | > th | dose independent | sin | 5 | NA |
| 611 | 19.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 651 | 19.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 681 | 19.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 682 | 19.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 774 | 19.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 827 | 19.48 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 828 | 19.48 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 861 | 19.50 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 929 | 19.52 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 931 | 19.53 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 22 |