Os12g0285100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0285100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.83 | 0.384 | 11.1 | -0.496 | 0.402 | -0.789 | -1.16 | -0.208 | -0.184 | 22.3 | 29.9 | 10 | -- | -- |
| 66.89 | 0.381 | 11.1 | -0.515 | 0.4 | -0.792 | -1.24 | -- | -0.188 | 22.4 | 29.99 | 10 | -- | -- |
| 71.12 | 0.393 | 11 | -0.317 | 0.413 | -0.712 | -- | -0.982 | -0.126 | 21.6 | 29.75 | 7 | -- | -- |
| 72.57 | 0.397 | 11.1 | -0.47 | 0.413 | -0.734 | -- | -- | -0.175 | 21.6 | 30 | 9 | -- | -- |
| 78.64 | 0.413 | 11 | -0.486 | -- | -0.789 | -- | -0.185 | -0.204 | -- | 26.28 | 318 | -- | -- |
| 77.37 | 0.412 | 11 | -0.339 | 0.338 | -- | -1.09 | -- | -0.0392 | 20.9 | -- | -- | -- | -- |
| 79.7 | 0.418 | 11 | -0.294 | 0.399 | -- | -- | -- | -0.034 | 19.2 | -- | -- | -- | -- |
| 78.62 | 0.413 | 11 | -0.495 | -- | -0.76 | -- | -- | -0.204 | -- | 26.37 | 335 | -- | -- |
| 77.77 | 0.413 | 11 | -- | 0.395 | -0.529 | -- | -- | -0.0895 | 20.9 | 30 | 9 | -- | -- |
| 88.13 | 0.439 | 11 | -0.301 | -- | -- | -- | -- | -0.041 | -- | -- | -- | -- | -- |
| 81.98 | 0.424 | 11 | -- | 0.402 | -- | -- | -- | -0.00128 | 19.1 | -- | -- | -- | -- |
| 84.4 | 0.428 | 11 | -- | -- | -0.579 | -- | -- | -0.115 | -- | 26.6 | 299 | -- | -- |
| 90.52 | 0.444 | 11 | -- | -- | -- | -- | -- | -0.00754 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.68 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 17 |
| 2 | 61.81 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 9 | 16 |
| 6 | 62.13 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 17 |
| 20 | 62.69 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 22 | 62.70 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 32 | 62.92 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 42 | 63.26 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 45 | 63.26 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 53 | 63.61 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 54 | 63.64 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 55 | 63.66 | temperature | 30.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 65 | 63.81 | temperature | 30.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 76 | 63.89 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 105 | 64.18 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 113 | 64.26 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 7 | 17 |
| 130 | 64.36 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 16 |
| 137 | 64.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 149 | 64.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 173 | 64.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 202 | 64.79 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 219 | 64.84 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 244 | 64.92 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 249 | 64.95 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 19 |
| 257 | 64.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 268 | 65.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 270 | 65.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 290 | 65.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 295 | 65.09 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 300 | 65.11 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 15 |
| 303 | 65.11 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 304 | 65.11 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 306 | 65.12 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 323 | 65.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 343 | 65.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 379 | 65.33 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 382 | 65.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 392 | 65.37 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 400 | 65.39 | temperature | 25.0 | 90 | < th | dose independent | sin | 5 | NA |
| 401 | 65.39 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 10 |
| 406 | 65.40 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 412 | 65.40 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 415 | 65.40 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 431 | 65.44 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 469 | 65.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 476 | 65.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 19 |
| 478 | 65.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 484 | 65.58 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 488 | 65.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 501 | 65.62 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 19 | 8 |
| 504 | 65.63 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 9 |
| 521 | 65.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 529 | 65.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 530 | 65.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 531 | 65.68 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 536 | 65.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 539 | 65.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 547 | 65.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 569 | 65.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 573 | 65.76 | atmosphere | 1015.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 578 | 65.77 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 591 | 65.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 599 | 65.81 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 600 | 65.81 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 8 | 12 |
| 633 | 65.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 637 | 65.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 639 | 65.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 651 | 65.88 | wind | 7.0 | 30 | < th | dose dependent | rect. | 3 | 5 |
| 702 | 65.95 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 5 |
| 705 | 65.95 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 708 | 65.95 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 710 | 65.96 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 738 | 65.98 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 765 | 66.03 | atmosphere | 1010.0 | 720 | < th | dose dependent | rect. | 11 | 6 |
| 775 | 66.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 779 | 66.05 | temperature | 10.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 786 | 66.06 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 787 | 66.06 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 796 | 66.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 797 | 66.07 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 800 | 66.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 803 | 66.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 804 | 66.07 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 810 | 66.07 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 817 | 66.08 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 819 | 66.08 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 839 | 66.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 841 | 66.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 843 | 66.10 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 8 | 9 |
| 847 | 66.11 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 853 | 66.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 859 | 66.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 876 | 66.13 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 880 | 66.14 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 887 | 66.14 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 2 | 6 |
| 897 | 66.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 905 | 66.16 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 907 | 66.16 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 908 | 66.16 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 910 | 66.16 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 915 | 66.16 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 916 | 66.16 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 917 | 66.16 | wind | 5.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 931 | 66.18 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 932 | 66.18 | humidity | 90.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 960 | 66.20 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 963 | 66.20 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 967 | 66.21 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 980 | 66.21 | radiation | 10.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 989 | 66.22 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 999 | 66.22 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 15 |