Os12g0284800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0284800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 201.02 | 0.666 | 5.99 | 1.43 | 0.818 | 3.25 | 0.608 | 0.0666 | -0.0444 | 6.91 | 25.55 | 257 | 23.7 | 19.4 |
| 200.44 | 0.659 | 5.99 | 1.45 | 0.756 | 3.25 | 0.745 | -- | -0.0431 | 6.85 | 25.8 | 270 | 23.5 | 19.4 |
| 200.97 | 0.66 | 6 | 1.41 | 0.763 | 3.34 | -- | 0.48 | -0.0358 | 6.46 | 25.8 | 283 | 23.6 | 19.2 |
| 201 | 0.66 | 5.99 | 1.48 | 0.72 | 3.29 | -- | -- | -0.0124 | 6.53 | 26.05 | 285 | 23.4 | 19.3 |
| 210.73 | 0.676 | 6.01 | 1.54 | -- | 3.64 | -- | 0.11 | 0.0762 | -- | 27.45 | 293 | 23.2 | 18.3 |
| 317.13 | 0.835 | 6.08 | 0.832 | 1.45 | -- | 0.37 | -- | -0.532 | 7.23 | -- | -- | -- | -- |
| 317.5 | 0.834 | 6.08 | 0.84 | 1.45 | -- | -- | -- | -0.533 | 7.23 | -- | -- | -- | -- |
| 210.2 | 0.675 | 5.99 | 1.54 | -- | 3.65 | -- | -- | 0.0528 | -- | 27.65 | 298 | 23.1 | 18.3 |
| 254.21 | 0.743 | 6.01 | -- | 0.917 | 2.8 | -- | -- | -0.182 | 6.53 | 25.83 | 253 | 23.9 | 19.6 |
| 428.27 | 0.967 | 6.12 | 0.866 | -- | -- | -- | -- | -0.508 | -- | -- | -- | -- | -- |
| 336.1 | 0.858 | 6.1 | -- | 1.45 | -- | -- | -- | -0.627 | 7.19 | -- | -- | -- | -- |
| 263.85 | 0.757 | 6.06 | -- | -- | 3.13 | -- | -- | -0.261 | -- | 28.36 | 265 | 23.7 | 14.9 |
| 448.07 | 0.988 | 6.14 | -- | -- | -- | -- | -- | -0.604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 203.94 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 10 | 210.14 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |
| 18 | 212.24 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 30 | 214.41 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 107 | 223.10 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 109 | 223.19 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 120 | 223.72 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 130 | 224.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 156 | 224.65 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 281 | 227.58 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 304 | 228.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 311 | 228.29 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 349 | 229.36 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 383 | 230.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 613 | 234.46 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 19 |
| 628 | 234.87 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 21 |
| 630 | 234.92 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 16 |
| 660 | 235.46 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 14 |
| 669 | 235.61 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 23 |
| 687 | 235.90 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 20 |
| 701 | 236.09 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 23 |
| 702 | 236.11 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 16 |
| 704 | 236.12 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 709 | 236.17 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 716 | 236.28 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 746 | 236.60 | temperature | 20 | 720 | < th | dose independent | rect. | 16 | 20 |
| 750 | 236.64 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 17 |
| 764 | 236.74 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 767 | 236.77 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 18 |
| 781 | 236.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 798 | 237.03 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 18 |
| 800 | 237.03 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 20 |
| 811 | 237.21 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 22 |
| 841 | 237.44 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 23 |
| 890 | 237.81 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 23 |
| 905 | 237.96 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 908 | 237.97 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 925 | 238.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 2 |