Os12g0283900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os12g0283900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.86 | 0.36 | 8.22 | 0.00694 | 1.74 | 0.96 | -0.25 | -0.655 | -0.571 | 5.22 | 23.22 | 101 | -- | -- |
| 59.4 | 0.359 | 8.23 | -0.042 | 1.73 | 1.09 | -0.326 | -- | -0.57 | 5.23 | 23.04 | 115 | -- | -- |
| 58.99 | 0.358 | 8.22 | 0.0194 | 1.74 | 0.941 | -- | -0.761 | -0.566 | 5.22 | 23.3 | 104 | -- | -- |
| 59.73 | 0.36 | 8.23 | -0.0595 | 1.73 | 1.08 | -- | -- | -0.584 | 5.24 | 23.02 | 109 | -- | -- |
| 171.72 | 0.61 | 8.19 | 0.391 | -- | 1.97 | -- | -0.848 | -0.272 | -- | 29.77 | 226 | -- | -- |
| 72.96 | 0.4 | 8.27 | -0.294 | 1.82 | -- | -0.457 | -- | -0.727 | 4.99 | -- | -- | -- | -- |
| 73.49 | 0.401 | 8.27 | -0.293 | 1.81 | -- | -- | -- | -0.725 | 5 | -- | -- | -- | -- |
| 172.91 | 0.612 | 8.2 | 0.295 | -- | 2 | -- | -- | -0.302 | -- | 29.7 | 234 | -- | -- |
| 59.82 | 0.36 | 8.23 | -- | 1.73 | 1.1 | -- | -- | -0.578 | 5.25 | 23.05 | 111 | -- | -- |
| 246.2 | 0.733 | 8.29 | -0.227 | -- | -- | -- | -- | -0.679 | -- | -- | -- | -- | -- |
| 75.75 | 0.407 | 8.26 | -- | 1.81 | -- | -- | -- | -0.692 | 5.01 | -- | -- | -- | -- |
| 174.33 | 0.615 | 8.21 | -- | -- | 1.91 | -- | -- | -0.335 | -- | 29.7 | 225 | -- | -- |
| 247.56 | 0.734 | 8.28 | -- | -- | -- | -- | -- | -0.653 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.84 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 3 | 57.32 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 4 | 57.35 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 23 | 57.76 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 27 | 57.82 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 29 | 57.85 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 30 | 57.87 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 32 | 57.90 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 46 | 58.03 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 54 | 58.12 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 63 | 58.19 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 73 | 58.29 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 77 | 58.31 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 78 | 58.31 | wind | 1.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 92 | 58.40 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 95 | 58.41 | wind | 9.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 100 | 58.44 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 16 |
| 118 | 58.52 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 16 |
| 168 | 58.67 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 182 | 58.71 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 21 |
| 225 | 58.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 228 | 58.83 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 238 | 58.86 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 240 | 58.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 243 | 58.87 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 273 | 58.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 275 | 58.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 280 | 58.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 281 | 58.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 299 | 59.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 301 | 59.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 324 | 59.07 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 395 | 59.22 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 422 | 59.27 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 428 | 59.28 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 452 | 59.33 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 464 | 59.35 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 577 | 59.50 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 601 | 59.53 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 641 | 59.56 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 9 | 22 |
| 657 | 59.58 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 665 | 59.58 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 685 | 59.61 | wind | 3.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 686 | 59.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 717 | 59.64 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 758 | 59.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 763 | 59.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 788 | 59.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 791 | 59.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 814 | 59.70 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 835 | 59.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 842 | 59.72 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 843 | 59.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 878 | 59.74 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 891 | 59.75 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 923 | 59.77 | wind | 3.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 945 | 59.78 | wind | 1.0 | 43200 | > th | dose dependent | sin | 4 | NA |
| 961 | 59.79 | wind | 3.0 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 977 | 59.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 997 | 59.81 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 20 |