Os12g0276300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0276300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.5 | 0.505 | 2.76 | 0.378 | 0.0482 | -4.56 | 0.126 | 21.1 | 0.0185 | 7.83 | 0.5007 | 319 | -- | -- |
| 120.74 | 0.512 | 2.84 | 0.156 | 0.000684 | -0.31 | 0.0157 | -- | 0.00442 | 22.3 | -2.571 | 128 | -- | -- |
| 115.35 | 0.5 | 2.76 | 0.344 | 0.0636 | -3.96 | -- | 18.6 | 0.0458 | 7.03 | 0.9548 | 362 | -- | -- |
| 120.73 | 0.512 | 2.84 | 0.163 | 0.0114 | -0.297 | -- | -- | 0.00729 | 2.85 | -0.04617 | 128 | -- | -- |
| 115.04 | 0.5 | 2.75 | 0.408 | -- | -6.06 | -- | 27.4 | 0.019 | -- | 1.255 | 360 | -- | -- |
| 120.85 | 0.515 | 2.84 | 0.15 | 0.0261 | -- | -0.0625 | -- | 0.00708 | 5.2 | -- | -- | -- | -- |
| 120.86 | 0.515 | 2.84 | 0.15 | 0.0257 | -- | -- | -- | 0.00738 | 5.21 | -- | -- | -- | -- |
| 120.74 | 0.512 | 2.84 | 0.161 | -- | -0.295 | -- | -- | 0.00603 | -- | -0.001042 | 128 | -- | -- |
| 121.37 | 0.513 | 2.85 | -- | 0.0259 | -0.21 | -- | -- | -0.0114 | 4.66 | -0.1372 | 128 | -- | -- |
| 120.89 | 0.514 | 2.84 | 0.151 | -- | -- | -- | -- | 0.00802 | -- | -- | -- | -- | -- |
| 121.45 | 0.516 | 2.85 | -- | 0.0284 | -- | -- | -- | -0.00933 | 5.02 | -- | -- | -- | -- |
| 121.41 | 0.513 | 2.85 | -- | -- | -0.218 | -- | -- | -0.011 | -- | -0.007088 | 128 | -- | -- |
| 121.49 | 0.514 | 2.85 | -- | -- | -- | -- | -- | -0.00872 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.91 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 5 | 107.91 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 9 | 109.65 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 12 | 111.66 | radiation | 40.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 50 | 112.17 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 55 | 112.17 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 66 | 112.20 | wind | 1.0 | 270 | < th | dose independent | rect. | 16 | 3 |
| 69 | 112.22 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 76 | 112.40 | temperature | 25.0 | 30 | > th | dose independent | rect. | 21 | 1 |
| 79 | 112.84 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 81 | 112.86 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 83 | 112.86 | wind | 1.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 84 | 112.92 | temperature | 30.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 113 | 113.48 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 115 | 113.53 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 3 |
| 116 | 113.57 | humidity | 60.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 117 | 113.60 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 9 | 4 |
| 160 | 113.81 | temperature | 30.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 165 | 113.90 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 205 | 114.16 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 3 |
| 209 | 114.20 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 235 | 114.46 | radiation | 40.0 | 10 | > th | dose independent | sin | 13 | NA |
| 241 | 114.52 | radiation | 40.0 | 10 | < th | dose independent | sin | 13 | NA |
| 260 | 114.72 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 11 |
| 265 | 114.77 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 8 |
| 277 | 114.92 | wind | 1.0 | 270 | < th | dose independent | rect. | 18 | 1 |
| 278 | 114.92 | wind | 1.0 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 307 | 115.08 | temperature | 30.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 341 | 115.51 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 366 | 115.74 | temperature | 25.0 | 10 | > th | dose independent | rect. | 21 | 4 |
| 370 | 115.76 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 422 | 115.97 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 425 | 116.00 | radiation | 40.0 | 10 | < th | dose independent | rect. | 2 | 22 |
| 436 | 116.06 | temperature | 30.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 437 | 116.07 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 439 | 116.10 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 22 | 1 |
| 463 | 116.16 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 484 | 116.26 | wind | 3.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 487 | 116.28 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 4 |
| 491 | 116.32 | humidity | 90.0 | 270 | > th | dose dependent | sin | 20 | NA |
| 493 | 116.36 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 4 |
| 496 | 116.38 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 529 | 116.46 | wind | 3.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 566 | 116.47 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 571 | 116.49 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 625 | 116.65 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 672 | 116.74 | humidity | 90.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 697 | 116.79 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 13 | 1 |
| 831 | 117.02 | humidity | 90.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 832 | 117.02 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 1 |
| 840 | 117.02 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 841 | 117.02 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 851 | 117.05 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 872 | 117.08 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 9 |
| 873 | 117.08 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 880 | 117.09 | radiation | 30.0 | 10 | > th | dose dependent | sin | 14 | NA |
| 885 | 117.10 | radiation | 40.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 902 | 117.15 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 6 |
| 914 | 117.16 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 12 |
| 916 | 117.18 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 3 | 6 |
| 921 | 117.19 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 947 | 117.23 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 974 | 117.24 | wind | 3.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 977 | 117.25 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 982 | 117.27 | radiation | 40.0 | 10 | > th | dose independent | rect. | 10 | 5 |