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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0270900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sulfotransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.22 (0.0251) R2 : 1.62e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00454 (0.0527) R2dN8 : 2.1e-05 R2N8 : 1.62e-05
σ : 0.472
deviance : 102.19
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.18 0.436 3.17 0.484 0.113 -7.3 -0.511 74.9 0.0266 4.68 34.67 62 -- --
85.41 0.434 3.22 0.138 0.107 3.85 -0.533 -- 0.0259 4.61 34.67 62 -- --
85.92 0.432 3.18 0.438 0.114 -7.38 -- 76.2 0.0308 6.34 34.88 60 -- --
86.01 0.435 3.22 0.142 0.118 3.87 -- -- 0.0289 6.28 34.88 60 -- --
86.63 0.433 3.18 0.437 -- -7.44 -- 76.6 0.0307 -- 34.87 60 -- --
100.12 0.469 3.22 0.156 0.0705 -- -0.631 -- 0.0176 4.26 -- -- -- --
100.9 0.47 3.22 0.163 0.103 -- -- -- 0.0211 7.29 -- -- -- --
86.74 0.436 3.22 0.145 -- 3.84 -- -- 0.0314 -- 34.88 60 -- --
86.54 0.436 3.22 -- 0.12 3.89 -- -- 0.0132 6.21 34.88 60 -- --
101.47 0.471 3.22 0.165 -- -- -- -- 0.0229 -- -- -- -- --
101.6 0.472 3.22 -- 0.105 -- -- -- 0.00292 7.19 -- -- -- --
87.29 0.437 3.22 -- -- 3.86 -- -- 0.0154 -- 34.88 60 -- --
102.19 0.472 3.22 -- -- -- -- -- 0.00454 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.34 atmosphere 1000.0 90 < th dose independent rect. 12 1
2 85.36 humidity 50.0 90 < th dose independent rect. 13 1
3 85.36 humidity 50.0 90 < th dose dependent rect. 13 1
4 85.37 atmosphere 1000.0 90 < th dose dependent rect. 12 1
31 89.68 radiation 10.0 30 > th dose independent rect. 7 1
35 89.82 temperature 30.0 30 > th dose dependent rect. 13 1
68 90.79 humidity 80.0 10 < th dose independent rect. 6 2
78 91.15 humidity 80.0 10 < th dose independent rect. 2 6
98 92.03 temperature 25.0 30 > th dose independent rect. 7 1
115 92.40 radiation 1.0 4320 < th dose dependent rect. 21 1
129 92.60 atmosphere 1000.0 10 > th dose independent rect. 21 23
171 93.12 atmosphere 1005.0 10 > th dose independent rect. 20 1
175 93.15 humidity 90.0 10 < th dose independent rect. 20 1
176 93.15 humidity 90.0 30 < th dose dependent rect. 20 1
183 93.22 temperature 30.0 30 < th dose dependent rect. 20 1
192 93.25 atmosphere 995.0 10 > th dose dependent rect. 20 1
195 93.28 temperature 20.0 10 > th dose independent rect. 20 1
197 93.28 wind 5.0 30 < th dose dependent rect. 20 1
199 93.29 wind 1.0 30 > th dose independent rect. 20 1
200 93.29 wind 9.0 30 < th dose independent rect. 20 1
201 93.29 temperature 10.0 30 > th dose independent rect. 20 1
203 93.29 temperature 30.0 30 < th dose independent rect. 20 1
204 93.29 humidity 50.0 30 > th dose independent rect. 20 1
207 93.29 atmosphere 995.0 30 > th dose independent rect. 20 1
209 93.29 atmosphere 1010.0 30 < th dose independent rect. 20 1
211 93.29 radiation 1.0 30 < th dose independent rect. 20 1
216 93.29 precipitation 0.1 30 < th dose independent rect. 20 1
217 93.29 temperature 10.0 30 > th dose independent rect. 21 23
220 93.29 atmosphere 1015.0 30 < th dose dependent rect. 20 1
221 93.29 radiation 1.0 30 < th dose dependent rect. 20 1
226 93.29 precipitation 0.1 30 < th dose dependent rect. 20 1
231 93.31 wind 5.0 10 < th dose independent rect. 20 1
251 93.31 temperature 10.0 10 > th dose dependent rect. 20 1
263 93.34 wind 1.0 30 > th dose dependent rect. 20 1
266 93.34 humidity 50.0 30 > th dose dependent rect. 20 1
267 93.34 temperature 25.0 30 > th dose dependent rect. 20 3
278 93.43 temperature 10.0 1440 > th dose independent rect. 21 1
281 93.43 temperature 30.0 1440 < th dose independent rect. 21 1
286 93.43 humidity 50.0 1440 > th dose independent rect. 21 1
292 93.43 atmosphere 995.0 1440 > th dose independent rect. 21 1
293 93.43 radiation 1.0 1440 < th dose independent rect. 21 1
313 93.43 temperature 10.0 1440 > th dose independent rect. 22 23
329 93.52 temperature 30.0 10 > th dose dependent rect. 13 6
467 93.83 precipitation 0.1 30 < th dose independent rect. 21 23
468 93.83 precipitation 0.1 30 < th dose dependent rect. 21 23
509 93.99 temperature 30.0 270 > th dose dependent sin 8 NA
517 94.03 temperature 30.0 270 > th dose dependent rect. 10 1
519 94.04 temperature 20.0 30 > th dose dependent rect. 7 1
549 94.16 wind 9.0 30 < th dose independent rect. 21 23
560 94.29 atmosphere 1000.0 90 > th dose independent rect. 8 11
572 94.49 humidity 50.0 30 > th dose independent rect. 21 23
575 94.53 atmosphere 1005.0 30 > th dose independent rect. 7 1
577 94.58 temperature 30.0 30 > th dose independent rect. 13 1
614 94.71 atmosphere 1000.0 30 > th dose independent rect. 8 23
627 94.82 atmosphere 1000.0 720 > th dose independent rect. 8 1
628 94.84 wind 3.0 30 < th dose independent rect. 7 1
631 94.87 wind 5.0 10 < th dose dependent rect. 7 1
662 94.98 temperature 25.0 30 > th dose independent rect. 20 12
673 95.06 atmosphere 1000.0 10 < th dose dependent sin 23 NA
677 95.08 humidity 90.0 10 < th dose dependent rect. 7 1
742 95.30 temperature 25.0 10 > th dose dependent rect. 20 10
744 95.32 wind 7.0 90 < th dose independent rect. 19 13
771 95.36 wind 1.0 90 > th dose independent rect. 8 11
800 95.41 atmosphere 1000.0 10 < th dose dependent rect. 1 14
831 95.49 temperature 30.0 90 > th dose dependent sin 1 NA
865 95.54 atmosphere 995.0 30 > th dose dependent rect. 7 1
867 95.54 wind 1.0 720 < th dose dependent rect. 5 9
872 95.56 wind 1.0 30 > th dose independent rect. 7 1
896 95.61 temperature 25.0 30 > th dose dependent rect. 20 12
900 95.63 precipitation 0.1 90 < th dose independent rect. 19 13
904 95.63 precipitation 0.1 90 < th dose dependent rect. 19 13
911 95.66 radiation 1.0 10 > th dose dependent rect. 7 1
914 95.67 temperature 10.0 90 > th dose independent rect. 8 11
915 95.67 atmosphere 1015.0 90 < th dose independent rect. 8 11
916 95.67 temperature 10.0 90 > th dose independent rect. 19 13
917 95.67 temperature 30.0 90 < th dose independent rect. 19 13
918 95.67 humidity 50.0 90 > th dose independent rect. 19 13
920 95.67 atmosphere 995.0 90 > th dose independent rect. 19 13
921 95.67 humidity 60.0 10 < th dose dependent rect. 14 1
923 95.67 humidity 90.0 30 < th dose dependent rect. 2 6
929 95.69 wind 1.0 90 > th dose independent rect. 19 13
981 95.73 precipitation 0.1 90 < th dose independent rect. 8 11
982 95.73 radiation 40.0 90 < th dose independent rect. 19 13
986 95.73 precipitation 0.1 90 < th dose dependent rect. 8 11
995 95.76 wind 3.0 90 < th dose dependent rect. 12 1