Os12g0268100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0268100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 257.41 | 0.754 | 3.09 | 0.547 | 0.256 | 16.4 | -0.107 | 31 | 0.2 | 7.8 | 1016 | 1591 | -- | -- |
| 271.66 | 0.768 | 2.95 | 0.354 | 0.31 | 1.41 | 0.0559 | -- | 0.243 | 7.76 | 1016 | 2631 | -- | -- |
| 256.18 | 0.745 | 3.15 | 0.64 | 0.299 | 22.7 | -- | 44.2 | 0.186 | 8.05 | 1017 | 1584 | -- | -- |
| 269.74 | 0.765 | 2.96 | 0.347 | 0.297 | 1.59 | -- | -- | 0.245 | 7.9 | 1016 | 3354 | -- | -- |
| 259.57 | 0.75 | 3.17 | 0.719 | -- | 24.7 | -- | 48.1 | 0.206 | -- | 1017 | 1584 | -- | -- |
| 282.7 | 0.788 | 2.98 | 0.223 | 0.302 | -- | 0.0228 | -- | 0.163 | 8.34 | -- | -- | -- | -- |
| 282.7 | 0.787 | 2.98 | 0.224 | 0.302 | -- | -- | -- | 0.163 | 8.35 | -- | -- | -- | -- |
| 274.52 | 0.772 | 2.97 | 0.346 | -- | 1.52 | -- | -- | 0.227 | -- | 1016 | 3340 | -- | -- |
| 272.78 | 0.769 | 2.96 | -- | 0.298 | 1.41 | -- | -- | 0.191 | 7.81 | 1016 | 3354 | -- | -- |
| 287.77 | 0.793 | 2.99 | 0.226 | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
| 284.02 | 0.788 | 2.98 | -- | 0.303 | -- | -- | -- | 0.138 | 8.29 | -- | -- | -- | -- |
| 277.6 | 0.776 | 2.98 | -- | -- | 1.4 | -- | -- | 0.185 | -- | 1016 | 3343 | -- | -- |
| 289.11 | 0.794 | 2.99 | -- | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 253.39 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 4 | 253.50 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 5 | 253.50 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 52 | 260.01 | atmosphere | 1015.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 64 | 260.72 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 82 | 261.35 | atmosphere | 1015.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 90 | 261.58 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 91 | 261.58 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 151 | 262.16 | atmosphere | 1015.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 169 | 262.30 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 181 | 262.54 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 209 | 262.98 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 221 | 263.26 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 237 | 263.26 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 258 | 263.45 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 283 | 263.75 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 330 | 264.29 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 380 | 264.78 | atmosphere | 1010.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 511 | 266.30 | temperature | 25.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 517 | 266.58 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 618 | 269.13 | radiation | 20.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 625 | 269.29 | wind | 3.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 626 | 269.30 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 629 | 269.34 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 631 | 269.37 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 14 |
| 637 | 269.44 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 641 | 269.49 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 5 | 16 |
| 662 | 269.67 | atmosphere | 1015.0 | 1440 | > th | dose dependent | no | NA | NA |
| 663 | 269.67 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 10 | 18 |
| 686 | 269.73 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 698 | 269.83 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 710 | 269.96 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 746 | 270.34 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 757 | 270.41 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 761 | 270.46 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 770 | 270.59 | temperature | 15.0 | 720 | > th | dose independent | rect. | 8 | 16 |
| 793 | 270.84 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 5 | 5 |
| 795 | 270.86 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 4 | 7 |
| 816 | 270.91 | atmosphere | 1010.0 | 720 | > th | dose dependent | rect. | 23 | 3 |
| 821 | 270.97 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 1 | 9 |
| 822 | 270.98 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 830 | 270.98 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 831 | 270.99 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 832 | 271.00 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 834 | 271.00 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 836 | 271.02 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 838 | 271.02 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 7 | 3 |
| 839 | 271.02 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 2 | 9 |
| 845 | 271.03 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 865 | 271.10 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 13 | 22 |
| 872 | 271.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 873 | 271.12 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 875 | 271.12 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 879 | 271.14 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 13 | 19 |
| 880 | 271.14 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 908 | 271.22 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 919 | 271.23 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 935 | 271.30 | wind | 7.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 937 | 271.31 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 952 | 271.41 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 12 |
| 954 | 271.42 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 973 | 271.59 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 18 | 14 |
| 999 | 271.68 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 9 | 9 |