Os12g0268000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1) (ARP-2).
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Os12g0268000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1) (ARP-2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.05 | 0.683 | 8.64 | 1.8 | 0.286 | -0.746 | -1.22 | 3.43 | 0.778 | 17.3 | 20.4 | 357 | -- | -- |
| 237.98 | 0.718 | 8.72 | 1.33 | 0.195 | -1.1 | 0.137 | -- | 0.7 | 16.8 | 21.16 | 2551 | -- | -- |
| 213.84 | 0.681 | 8.64 | 1.76 | 0.291 | -0.791 | -- | 3.12 | 0.769 | 16.2 | 20.42 | 371 | -- | -- |
| 219.19 | 0.69 | 8.64 | 1.74 | 0.0125 | -1.81 | -- | -- | 0.855 | 5.58 | 18.6 | 2329 | -- | -- |
| 218.25 | 0.688 | 8.64 | 1.75 | -- | -0.724 | -- | 3.2 | 0.753 | -- | 20.48 | 387 | -- | -- |
| 284.18 | 0.79 | 8.77 | 0.842 | 0.201 | -- | 0.105 | -- | 0.424 | 15.7 | -- | -- | -- | -- |
| 284.21 | 0.789 | 8.77 | 0.844 | 0.203 | -- | -- | -- | 0.425 | 15.9 | -- | -- | -- | -- |
| 216.09 | 0.685 | 8.69 | 1.8 | -- | -2.11 | -- | -- | 0.787 | -- | 18.4 | 2251 | -- | -- |
| 271.65 | 0.768 | 8.76 | -- | 0.134 | -1.95 | -- | -- | 0.478 | 15.8 | 17.6 | 2006 | -- | -- |
| 286.46 | 0.791 | 8.77 | 0.835 | -- | -- | -- | -- | 0.419 | -- | -- | -- | -- | -- |
| 302.97 | 0.814 | 8.79 | -- | 0.186 | -- | -- | -- | 0.331 | 16 | -- | -- | -- | -- |
| 272.74 | 0.769 | 8.76 | -- | -- | -1.95 | -- | -- | 0.455 | -- | 17.57 | 1973 | -- | -- |
| 304.86 | 0.815 | 8.79 | -- | -- | -- | -- | -- | 0.327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.89 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 3 | 210.62 | wind | 9 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 5 | 210.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 6 | 210.72 | wind | 9 | 43200 | < th | dose independent | rect. | 22 | 17 |
| 9 | 210.97 | wind | 9 | 43200 | < th | dose independent | sin | 3 | NA |
| 11 | 210.99 | wind | 9 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 13 | 211.01 | wind | 9 | 43200 | > th | dose independent | sin | 3 | NA |
| 19 | 211.11 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 20 | 211.14 | wind | 9 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 25 | 211.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 29 | 211.25 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 6 |
| 30 | 211.27 | wind | 9 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 34 | 211.29 | wind | 7 | 43200 | > th | dose dependent | rect. | 22 | 17 |
| 35 | 211.31 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 37 | 211.33 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 45 | 211.37 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 46 | 211.37 | wind | 7 | 43200 | > th | dose dependent | sin | 3 | NA |
| 49 | 211.39 | wind | 9 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 54 | 211.45 | wind | 9 | 43200 | > th | dose dependent | rect. | 9 | 11 |
| 71 | 211.55 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 107 | 211.68 | wind | 9 | 43200 | < th | dose independent | rect. | 7 | 7 |
| 129 | 211.92 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 139 | 211.99 | wind | 9 | 43200 | > th | dose dependent | sin | 21 | NA |
| 141 | 212.01 | wind | 9 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 157 | 212.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 22 |
| 179 | 212.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 180 | 212.19 | radiation | 20 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 191 | 212.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 196 | 212.28 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 20 |
| 218 | 212.42 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 22 |
| 227 | 212.47 | temperature | 20 | 1440 | < th | dose independent | sin | 6 | NA |
| 262 | 212.66 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 22 |
| 264 | 212.68 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 272 | 212.72 | wind | 9 | 43200 | < th | dose independent | rect. | 22 | 22 |
| 279 | 212.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 282 | 212.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 312 | 212.91 | temperature | 20 | 1440 | > th | dose independent | sin | 6 | NA |
| 319 | 212.94 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 23 |
| 335 | 213.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 339 | 213.04 | wind | 9 | 43200 | > th | dose independent | no | NA | NA |
| 340 | 213.04 | radiation | 40 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 343 | 213.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 345 | 213.05 | wind | 9 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 347 | 213.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 357 | 213.10 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 433 | 213.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 455 | 213.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 461 | 213.41 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 466 | 213.41 | wind | 9 | 43200 | > th | dose dependent | rect. | 21 | 23 |
| 484 | 213.46 | wind | 9 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 487 | 213.47 | wind | 9 | 43200 | < th | dose independent | no | NA | NA |
| 532 | 213.57 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 538 | 213.59 | wind | 9 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 589 | 213.74 | radiation | 40 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 603 | 213.77 | wind | 9 | 43200 | < th | dose independent | rect. | 1 | 19 |
| 607 | 213.77 | wind | 9 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 608 | 213.78 | radiation | 40 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 639 | 213.83 | wind | 9 | 43200 | > th | dose dependent | no | NA | NA |
| 686 | 213.93 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 788 | 214.25 | radiation | 10 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 828 | 214.34 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 3 |
| 841 | 214.37 | temperature | 25 | 4320 | < th | dose dependent | rect. | 11 | 5 |
| 891 | 214.56 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 22 |
| 893 | 214.57 | wind | 9 | 43200 | > th | dose dependent | sin | 13 | NA |
| 905 | 214.61 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 23 |
| 918 | 214.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 943 | 214.74 | radiation | 20 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 956 | 214.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 969 | 214.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 988 | 214.91 | wind | 9 | 43200 | > th | dose dependent | rect. | 22 | 3 |