Os12g0267500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0267500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 190.13 | 0.648 | 3.42 | 0.299 | 0.646 | 0.785 | 0.332 | 1.26 | 0.0591 | 19.5 | 20.6 | 1569 | -- | -- |
| 193.47 | 0.648 | 3.46 | 0.0486 | 0.629 | 0.641 | 0.356 | -- | -0.00545 | 19.5 | 20.61 | 1929 | -- | -- |
| 190.27 | 0.642 | 3.42 | 0.297 | 0.65 | 0.793 | -- | 1.3 | 0.0576 | 19.3 | 20.7 | 1415 | -- | -- |
| 193.6 | 0.648 | 3.46 | 0.0538 | 0.636 | 0.64 | -- | -- | 0.0226 | 19.5 | 20.6 | 1711 | -- | -- |
| 209.64 | 0.674 | 3.36 | 0.496 | -- | 0.599 | -- | 1.46 | 0.139 | -- | 22.01 | 2222 | -- | -- |
| 202.14 | 0.667 | 3.43 | 0.318 | 0.648 | -- | 0.425 | -- | 0.154 | 19.5 | -- | -- | -- | -- |
| 202.62 | 0.667 | 3.42 | 0.309 | 0.65 | -- | -- | -- | 0.156 | 19.4 | -- | -- | -- | -- |
| 213.57 | 0.681 | 3.45 | 0.0482 | -- | 0.582 | -- | -- | -0.0529 | -- | 22.07 | 2228 | -- | -- |
| 192.6 | 0.646 | 3.47 | -- | 0.613 | 0.553 | -- | -- | -0.0493 | 19.2 | 22 | 2485 | -- | -- |
| 225.18 | 0.701 | 3.41 | 0.299 | -- | -- | -- | -- | 0.145 | -- | -- | -- | -- | -- |
| 205.13 | 0.67 | 3.43 | -- | 0.648 | -- | -- | -- | 0.121 | 19.5 | -- | -- | -- | -- |
| 213.63 | 0.681 | 3.46 | -- | -- | 0.599 | -- | -- | -0.065 | -- | 22 | 2228 | -- | -- |
| 227.54 | 0.704 | 3.42 | -- | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.95 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 6 | 186.51 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 19 | 11 |
| 8 | 186.54 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 30 | 187.05 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 37 | 187.26 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 38 | 187.26 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 51 | 187.80 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 74 | 188.37 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 93 | 189.24 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 122 | 189.98 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 10 |
| 123 | 190.01 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 16 |
| 126 | 190.05 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 127 | 190.05 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 128 | 190.06 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 131 | 190.07 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 133 | 190.09 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 140 | 190.14 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 150 | 190.21 | humidity | 60.0 | 270 | < th | dose independent | rect. | 16 | 17 |
| 152 | 190.23 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 155 | 190.25 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 192 | 190.38 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 200 | 190.40 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 21 |
| 201 | 190.41 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 217 | 190.43 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 227 | 190.45 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 257 | 190.49 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 266 | 190.50 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 305 | 190.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 377 | 190.65 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 378 | 190.65 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 397 | 190.66 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 398 | 190.67 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 472 | 190.73 | wind | 3.0 | 720 | > th | dose independent | rect. | 15 | 1 |
| 557 | 190.81 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 585 | 190.85 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 601 | 190.86 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 622 | 190.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 689 | 190.96 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 693 | 190.97 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 715 | 190.99 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 788 | 191.05 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 892 | 191.13 | temperature | 20.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 943 | 191.16 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 950 | 191.17 | humidity | 60.0 | 270 | < th | dose independent | rect. | 16 | 1 |