Os12g0267200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclopropane-fatty-acyl-phospholipid synthase domain containing protein.
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Os12g0267200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclopropane-fatty-acyl-phospholipid synthase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 321.91 | 0.843 | 3.7 | -1.38 | 0.532 | 1.68 | -0.102 | 2.12 | -0.0864 | 1.64 | 0.1726 | 4198 | -- | -- |
| 324.16 | 0.839 | 3.69 | -1.17 | 0.522 | 1.21 | -0.364 | -- | -0.0603 | 1.39 | 0.9099 | 4161 | -- | -- |
| 321.81 | 0.836 | 3.7 | -1.38 | 0.545 | 1.68 | -- | 2.12 | -0.0969 | 1.57 | 0.1748 | 4173 | -- | -- |
| 324.17 | 0.839 | 3.66 | -1.15 | 0.532 | 1.24 | -- | -- | -0.026 | 1.29 | 0.84 | 4147 | -- | -- |
| 326.13 | 0.841 | 3.67 | -1.19 | -- | 1.66 | -- | 1.42 | -0.0503 | -- | 0.17 | 6165 | -- | -- |
| 345.7 | 0.872 | 3.69 | -1.49 | 0.395 | -- | -0.127 | -- | -0.217 | 3.31 | -- | -- | -- | -- |
| 345.73 | 0.871 | 3.69 | -1.49 | 0.396 | -- | -- | -- | -0.216 | 3.47 | -- | -- | -- | -- |
| 325.98 | 0.841 | 3.65 | -1.11 | -- | 1.31 | -- | -- | -0.0339 | -- | 0.8026 | 6159 | -- | -- |
| 353.14 | 0.875 | 3.6 | -- | 0.537 | 1.71 | -- | -- | 0.159 | 1.3 | 0.48 | 4194 | -- | -- |
| 354.52 | 0.88 | 3.69 | -1.48 | -- | -- | -- | -- | -0.206 | -- | -- | -- | -- | -- |
| 404.45 | 0.941 | 3.65 | -- | 0.366 | -- | -- | -- | -0.0502 | 3.49 | -- | -- | -- | -- |
| 342.43 | 0.862 | 3.54 | -- | -- | 1.54 | -- | -- | 0.324 | -- | 0.75 | 20575 | -- | -- |
| 411.97 | 0.947 | 3.65 | -- | -- | -- | -- | -- | -0.0422 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 323.34 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 2 | 323.65 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 3 | 323.66 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 4 | 323.69 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 5 | 323.72 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 12 | 324.00 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 15 | 324.02 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 16 | 324.10 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 2 | 9 |
| 19 | 324.18 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 23 | 324.23 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 24 | 324.24 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 26 | 324.28 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 27 | 324.30 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 30 | 324.32 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 33 | 324.35 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 36 | 324.36 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 37 | 324.38 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 43 | 324.41 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 47 | 324.44 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 57 | 324.48 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 61 | 324.50 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 81 | 324.55 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 91 | 324.59 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 97 | 324.60 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 98 | 324.62 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 107 | 324.64 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 119 | 324.67 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 129 | 324.67 | radiation | 1 | 4320 | < th | dose dependent | rect. | 14 | 5 |
| 137 | 324.68 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 141 | 324.68 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 8 |
| 155 | 324.70 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 176 | 324.72 | radiation | 40 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 195 | 324.75 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 204 | 324.76 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 211 | 324.77 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 224 | 324.78 | radiation | 20 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 228 | 324.79 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 237 | 324.80 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 286 | 324.83 | humidity | 60 | 43200 | < th | dose dependent | rect. | 23 | 15 |
| 377 | 324.92 | radiation | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 385 | 324.93 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 386 | 324.93 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 420 | 324.95 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 7 | 16 |
| 424 | 324.95 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 430 | 324.96 | atmosphere | 1010 | 14400 | < th | dose independent | sin | 18 | NA |
| 453 | 324.96 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 512 | 324.99 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 549 | 325.00 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 582 | 325.01 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 4 | NA |
| 584 | 325.01 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 600 | 325.02 | atmosphere | 1015 | 1440 | > th | dose dependent | sin | 4 | NA |
| 614 | 325.03 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 645 | 325.04 | atmosphere | 1010 | 14400 | > th | dose independent | sin | 18 | NA |
| 678 | 325.05 | radiation | 30 | 43200 | < th | dose independent | rect. | 16 | 19 |
| 679 | 325.05 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 12 | 22 |
| 789 | 325.09 | radiation | 30 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 792 | 325.09 | radiation | 30 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 803 | 325.09 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 811 | 325.09 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 812 | 325.09 | radiation | 1 | 4320 | < th | dose dependent | sin | 16 | NA |
| 822 | 325.10 | atmosphere | 1010 | 14400 | < th | dose independent | no | NA | NA |
| 855 | 325.10 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 859 | 325.11 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 900 | 325.11 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 908 | 325.12 | radiation | 10 | 43200 | < th | dose independent | sin | 9 | NA |
| 938 | 325.12 | radiation | 40 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 939 | 325.12 | radiation | 40 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 947 | 325.12 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 974 | 325.13 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 989 | 325.13 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 12 | 19 |