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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0266200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Fibrillin-2 precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.79 (0.0225) R2 : 0.0136
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.119 (0.0475) R2dN8 : 0.0176 R2N8 : 0.0136
σ : 0.425
deviance : 82.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.8 0.412 2.82 0.0435 0.104 0.634 0.0269 -2.6 0.155 6.58 0.5 3100 -- --
81.75 0.421 2.82 0.025 0.14 0.372 0.149 -- 0.156 6.56 0.475 3379 -- --
76.8 0.408 2.82 0.0437 0.104 0.634 -- -2.6 0.155 6.58 0.5 3100 -- --
81.05 0.419 2.78 0.0099 0.11 0.367 -- -- 0.189 7.55 0.4652 3370 -- --
77.37 0.41 2.82 0.044 -- 0.635 -- -2.57 0.155 -- 0.5 3100 -- --
82.02 0.425 2.79 0.0572 0.107 -- -0.0754 -- 0.124 7.8 -- -- -- --
82.03 0.424 2.79 0.0551 0.108 -- -- -- 0.124 7.64 -- -- -- --
81.5 0.42 2.78 -0.00408 -- 0.346 -- -- 0.152 -- 0.4433 3370 -- --
80.9 0.419 2.78 -- 0.104 0.337 -- -- 0.147 7.54 0.3996 3370 -- --
82.65 0.425 2.79 0.0566 -- -- -- -- 0.125 -- -- -- -- --
82.11 0.424 2.79 -- 0.108 -- -- -- 0.118 7.61 -- -- -- --
81.49 0.42 2.79 -- -- 0.343 -- -- 0.149 -- 0.3709 3370 -- --
82.74 0.425 2.79 -- -- -- -- -- 0.119 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 76.23 temperature 20.0 270 < th dose independent rect. 9 1
4 78.04 wind 7.0 270 > th dose dependent rect. 18 1
7 78.33 precipitation 0.1 4320 > th dose dependent rect. 21 1
8 78.34 precipitation 0.1 4320 > th dose dependent rect. 21 3
9 78.35 precipitation 0.1 4320 < th dose independent rect. 21 1
10 78.35 precipitation 0.1 4320 < th dose dependent rect. 21 1
12 78.36 precipitation 0.1 4320 > th dose independent rect. 21 1
22 78.50 humidity 80.0 90 < th dose independent rect. 20 13
23 78.51 precipitation 0.1 4320 > th dose independent rect. 11 1
24 78.51 precipitation 0.1 4320 > th dose independent rect. 9 3
25 78.51 precipitation 0.1 4320 > th dose dependent rect. 11 1
26 78.51 humidity 90.0 10 < th dose dependent rect. 3 2
28 78.51 precipitation 0.1 4320 > th dose dependent rect. 9 3
31 78.52 precipitation 0.1 4320 > th dose independent rect. 9 1
34 78.52 precipitation 0.1 4320 < th dose independent rect. 11 2
37 78.52 precipitation 0.1 4320 > th dose dependent rect. 9 1
40 78.52 precipitation 0.1 4320 < th dose dependent rect. 11 2
49 78.53 wind 1.0 4320 < th dose dependent rect. 19 1
64 78.55 precipitation 0.1 4320 > th dose dependent rect. 18 6
93 78.62 precipitation 0.1 4320 > th dose independent rect. 18 5
99 78.64 precipitation 0.1 4320 < th dose independent rect. 6 7
102 78.64 precipitation 0.1 4320 < th dose dependent rect. 6 7
103 78.64 precipitation 0.1 4320 > th dose dependent rect. 16 8
104 78.65 wind 1.0 4320 < th dose independent rect. 19 1
105 78.65 precipitation 0.1 4320 > th dose independent rect. 16 8
106 78.65 precipitation 0.1 4320 > th dose dependent rect. 16 1
108 78.66 precipitation 0.1 4320 > th dose independent rect. 16 1
109 78.66 precipitation 0.1 4320 < th dose independent rect. 16 1
110 78.66 humidity 80.0 90 < th dose independent rect. 2 2
112 78.66 precipitation 0.1 4320 > th dose independent rect. 6 7
114 78.66 humidity 80.0 90 < th dose independent rect. 21 10
116 78.66 precipitation 0.1 4320 < th dose dependent rect. 16 1
117 78.66 humidity 80.0 90 < th dose dependent rect. 2 2
119 78.66 precipitation 0.1 4320 > th dose dependent rect. 6 7
121 78.67 precipitation 0.1 4320 < th dose independent rect. 18 5
122 78.67 humidity 80.0 10 < th dose independent rect. 21 12
124 78.67 precipitation 0.1 4320 < th dose dependent rect. 18 5
136 78.69 precipitation 0.1 4320 < th dose independent rect. 16 7
144 78.69 precipitation 0.1 4320 < th dose dependent rect. 16 7
154 78.70 precipitation 0.1 4320 > th dose dependent rect. 8 16
155 78.71 precipitation 0.1 4320 < th dose independent rect. 8 1
158 78.71 radiation 1.0 270 > th dose dependent rect. 18 1
159 78.71 precipitation 0.1 4320 < th dose dependent rect. 8 1
175 78.72 humidity 80.0 90 < th dose dependent rect. 2 5
179 78.73 atmosphere 995.0 14400 > th dose independent rect. 3 1
189 78.74 precipitation 0.1 4320 > th dose independent rect. 8 16
209 78.76 precipitation 0.1 4320 < th dose independent rect. 8 16
214 78.76 precipitation 0.1 4320 < th dose dependent rect. 8 16
217 78.77 wind 7.0 270 > th dose independent rect. 18 1
231 78.78 humidity 80.0 10 < th dose independent rect. 22 7
255 78.79 precipitation 0.1 4320 < th dose independent rect. 10 14
269 78.79 precipitation 0.1 4320 < th dose dependent rect. 10 14
283 78.80 humidity 90.0 720 < th dose dependent rect. 3 1
362 78.85 radiation 1.0 1440 < th dose dependent rect. 24 5
376 78.87 atmosphere 995.0 14400 > th dose independent rect. 19 3
392 78.88 temperature 20.0 720 < th dose independent rect. 22 1
404 78.89 atmosphere 995.0 14400 > th dose independent rect. 2 7
441 78.91 humidity 90.0 720 < th dose independent rect. 3 2
448 78.91 precipitation 0.1 4320 > th dose dependent sin 18 NA
485 78.94 precipitation 0.1 4320 > th dose independent sin 19 NA
496 78.94 atmosphere 995.0 14400 < th dose dependent sin 7 NA
505 78.95 precipitation 0.1 4320 < th dose independent sin 18 NA
507 78.95 precipitation 0.1 4320 > th dose independent rect. 16 3
517 78.95 precipitation 0.1 4320 < th dose dependent sin 18 NA
520 78.95 precipitation 0.1 4320 > th dose dependent rect. 18 19
524 78.96 precipitation 0.1 4320 < th dose independent rect. 16 3
538 78.96 precipitation 0.1 4320 < th dose dependent rect. 16 3
540 78.96 atmosphere 995.0 14400 < th dose dependent rect. 18 10
550 78.96 precipitation 0.1 4320 > th dose dependent rect. 20 17
556 78.97 atmosphere 995.0 14400 < th dose independent rect. 1 1
561 78.97 atmosphere 995.0 14400 < th dose independent rect. 21 1
649 78.97 atmosphere 995.0 14400 > th dose independent rect. 19 9
721 78.97 atmosphere 995.0 14400 < th dose dependent rect. 1 1
726 78.97 atmosphere 995.0 14400 < th dose dependent rect. 21 1
885 78.98 humidity 80.0 10 < th dose independent rect. 3 1
899 78.98 atmosphere 995.0 14400 > th dose independent rect. 19 14
917 78.98 precipitation 0.1 4320 > th dose dependent rect. 16 21
924 78.99 atmosphere 995.0 14400 > th dose independent rect. 19 12
937 79.00 atmosphere 995.0 14400 > th dose independent rect. 23 1
954 79.01 wind 1.0 90 < th dose independent rect. 10 1
959 79.01 atmosphere 995.0 14400 > th dose independent rect. 22 11
964 79.01 precipitation 0.1 4320 > th dose independent rect. 18 19
965 79.01 precipitation 0.1 4320 < th dose independent rect. 18 19
970 79.01 precipitation 0.1 4320 < th dose dependent rect. 18 19
973 79.02 wind 1.0 4320 > th dose independent rect. 19 1
985 79.02 precipitation 0.1 4320 > th dose independent rect. 8 11
990 79.02 precipitation 0.1 4320 > th dose independent rect. 16 21
991 79.02 precipitation 0.1 4320 < th dose independent rect. 16 21